How To Install gbrowse-calign on Kali Linux

In this tutorial we learn how to install gbrowse-calign on Kali Linux. gbrowse-calign is CAlign helper

Introduction

In this tutorial we learn how to install gbrowse-calign on Kali Linux.

What is gbrowse-calign

gbrowse-calign is:

Generic Genome Browser is a simple but highly configurable web-based genome browser. It is a component of the Generic Model Organism Systems Database project (GMOD).

This package provides the CAlign helper for use with Realign. It speeds up Smith-Waterman alignment.

There are three methods to install gbrowse-calign on Kali Linux. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.

Install gbrowse-calign Using apt-get

Update apt database with apt-get using the following command.

sudo apt-get update

After updating apt database, We can install gbrowse-calign using apt-get by running the following command:

sudo apt-get -y install gbrowse-calign

Install gbrowse-calign Using apt

Update apt database with apt using the following command.

sudo apt update

After updating apt database, We can install gbrowse-calign using apt by running the following command:

sudo apt -y install gbrowse-calign

Install gbrowse-calign Using aptitude

If you want to follow this method, you might need to install aptitude on Kali Linux first since aptitude is usually not installed by default on Kali Linux. Update apt database with aptitude using the following command.

sudo aptitude update

After updating apt database, We can install gbrowse-calign using aptitude by running the following command:

sudo aptitude -y install gbrowse-calign

How To Uninstall gbrowse-calign on Kali Linux

To uninstall only the gbrowse-calign package we can use the following command:

sudo apt-get remove gbrowse-calign

Uninstall gbrowse-calign And Its Dependencies

To uninstall gbrowse-calign and its dependencies that are no longer needed by Kali Linux, we can use the command below:

sudo apt-get -y autoremove gbrowse-calign

Remove gbrowse-calign Configurations and Data

To remove gbrowse-calign configuration and data from Kali Linux we can use the following command:

sudo apt-get -y purge gbrowse-calign

Remove gbrowse-calign configuration, data, and all of its dependencies

We can use the following command to remove gbrowse-calign configurations, data and all of its dependencies, we can use the following command:

sudo apt-get -y autoremove --purge gbrowse-calign

Dependencies

gbrowse-calign have the following dependencies:

References

Summary

In this tutorial we learn how to install gbrowse-calign package on Kali Linux using different package management tools: apt, apt-get and aptitude.