How To Install embassy-domainatrix on Debian 12

Learn how to install embassy-domainatrix on Debian 12 with this tutorial. embassy-domainatrix is Extra EMBOSS commands to handle domain classification file

Introduction

In this tutorial we learn how to install embassy-domainatrix on Debian 12.

What is `embassy-domainatrix`

embassy-domainatrix is:

The DOMAINATRIX programs were developed by Jon Ison and colleagues at MRC HGMP for their protein domain research. They are included as an EMBASSY package as a work in progress.

Applications in the current domainatrix release are cathparse (generates DCF file from raw CATH files), domainnr (removes redundant domains from a DCF file), domainreso (removes low resolution domains from a DCF file), domainseqs (adds sequence records to a DCF file), domainsse (adds secondary structure records to a DCF file), scopparse (generates DCF file from raw SCOP files) and ssematch (searches a DCF file for secondary structure matches).

There are three methods to install embassy-domainatrix on Debian 12. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.

Install embassy-domainatrix Using apt-get

Update apt database with apt-get using the following command.

sudo apt-get update

After updating apt database, We can install embassy-domainatrix using apt-get by running the following command:

sudo apt-get -y install embassy-domainatrix

Install embassy-domainatrix Using apt

Update apt database with apt using the following command.

sudo apt update

After updating apt database, We can install embassy-domainatrix using apt by running the following command:

sudo apt -y install embassy-domainatrix

Install embassy-domainatrix Using aptitude

If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude using the following command.

sudo aptitude update

After updating apt database, We can install embassy-domainatrix using aptitude by running the following command:

sudo aptitude -y install embassy-domainatrix

How To Uninstall embassy-domainatrix on Debian 12

To uninstall only the embassy-domainatrix package we can use the following command:

sudo apt-get remove embassy-domainatrix

Uninstall embassy-domainatrix And Its Dependencies

To uninstall embassy-domainatrix and its dependencies that are no longer needed by Debian 12, we can use the command below:

sudo apt-get -y autoremove embassy-domainatrix

Remove embassy-domainatrix Configurations and Data

To remove embassy-domainatrix configuration and data from Debian 12 we can use the following command:

sudo apt-get -y purge embassy-domainatrix

Remove embassy-domainatrix configuration, data, and all of its dependencies

We can use the following command to remove embassy-domainatrix configurations, data and all of its dependencies, we can use the following command:

sudo apt-get -y autoremove --purge embassy-domainatrix

Dependencies

embassy-domainatrix have the following dependencies:

References

Summary

In this tutorial we learn how to install embassy-domainatrix package on Debian 12 using different package management tools: apt, apt-get and aptitude.