How To Install dialign-tx-data on Kali Linux
Introduction
In this tutorial we learn how to install dialign-tx-data on Kali Linux.
What is dialign-tx-data
dialign-tx-data is:
DIALIGN-TX is a command line tool to perform multiple alignment of protein or DNA sequences. It is a complete reimplementation of the segment-base approach including several new improvements and heuristics that significantly enhance the quality of the output alignments compared to DIALIGN 2.2 and DIALIGN-T. For pairwise alignment, DIALIGN-TX uses a fragment-chaining algorithm that favours chains of low-scoring local alignments over isolated high-scoring fragments. For multiple alignment, DIALIGN-TX uses an improved greedy procedure that is less sensitive to spurious local sequence similarities.
This package contain the score matrices and probability distribution files that DIALIGN-TX needs to align peptidic and nucleic sequences.
There are three methods to install dialign-tx-data on Kali Linux. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install dialign-tx-data Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get updateAfter updating apt database, We can install dialign-tx-data using apt-get by running the following command:
sudo apt-get -y install dialign-tx-dataInstall dialign-tx-data Using apt
Update apt database with apt using the following command.
sudo apt updateAfter updating apt database, We can install dialign-tx-data using apt by running the following command:
sudo apt -y install dialign-tx-dataInstall dialign-tx-data Using aptitude
If you want to follow this method, you might need to install aptitude on Kali Linux first since aptitude is usually not installed by default on Kali Linux. Update apt database with aptitude using the following command.
sudo aptitude updateAfter updating apt database, We can install dialign-tx-data using aptitude by running the following command:
sudo aptitude -y install dialign-tx-dataHow To Uninstall dialign-tx-data on Kali Linux
To uninstall only the dialign-tx-data package we can use the following command:
sudo apt-get remove dialign-tx-dataUninstall dialign-tx-data And Its Dependencies
To uninstall dialign-tx-data and its dependencies that are no longer needed by Kali Linux, we can use the command below:
sudo apt-get -y autoremove dialign-tx-dataRemove dialign-tx-data Configurations and Data
To remove dialign-tx-data configuration and data from Kali Linux we can use the following command:
sudo apt-get -y purge dialign-tx-dataRemove dialign-tx-data configuration, data, and all of its dependencies
We can use the following command to remove dialign-tx-data configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge dialign-tx-dataDependencies
dialign-tx-data have the following dependencies:
References
Summary
In this tutorial we learn how to install dialign-tx-data package on Kali Linux using different package management tools: apt, apt-get and aptitude.