How To Install cluster3 on Kali Linux
Introduction
In this tutorial we learn how to install cluster3 on Kali Linux.
What is cluster3
cluster3 is:
The open source clustering software available here contains clustering routines that can be used to analyze gene expression data. Routines for hierarchical (pairwise simple, complete, average, and centroid linkage) clustering, k-means and k-medians clustering, and 2D self-organizing maps are included. The routines are available in the form of a C clustering library, an extension module to Python, a module to Perl, as well as an enhanced version of Cluster, which was originally developed by Michael Eisen of Berkeley Lab. The C clustering library and the associated extension module for Python was released under the Python license. The Perl module was released under the Artistic License. Cluster 3.0 is covered by the original Cluster/TreeView license.
This package only contains the command line and motif gui versions of Cluster 3.0.
There are three methods to install cluster3 on Kali Linux. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install cluster3 Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get updateAfter updating apt database, We can install cluster3 using apt-get by running the following command:
sudo apt-get -y install cluster3Install cluster3 Using apt
Update apt database with apt using the following command.
sudo apt updateAfter updating apt database, We can install cluster3 using apt by running the following command:
sudo apt -y install cluster3Install cluster3 Using aptitude
If you want to follow this method, you might need to install aptitude on Kali Linux first since aptitude is usually not installed by default on Kali Linux. Update apt database with aptitude using the following command.
sudo aptitude updateAfter updating apt database, We can install cluster3 using aptitude by running the following command:
sudo aptitude -y install cluster3How To Uninstall cluster3 on Kali Linux
To uninstall only the cluster3 package we can use the following command:
sudo apt-get remove cluster3Uninstall cluster3 And Its Dependencies
To uninstall cluster3 and its dependencies that are no longer needed by Kali Linux, we can use the command below:
sudo apt-get -y autoremove cluster3Remove cluster3 Configurations and Data
To remove cluster3 configuration and data from Kali Linux we can use the following command:
sudo apt-get -y purge cluster3Remove cluster3 configuration, data, and all of its dependencies
We can use the following command to remove cluster3 configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge cluster3Dependencies
cluster3 have the following dependencies:
References
Summary
In this tutorial we learn how to install cluster3 package on Kali Linux using different package management tools: apt, apt-get and aptitude.