How To Install clonalorigin on Kali Linux

Introduction

In this tutorial we learn how to install clonalorigin on Kali Linux.

What is clonalorigin

clonalorigin is:

Bacteria, unlike us, can reproduce on their own. They do however have mechanisms that transfer DNA between organisms, a process more formally known as recombination. The mechanisms by which recombination takes place have been studied extensively in the laboratory but much remains to be understood concerning how, when and where recombination takes place within natural populations of bacteria and how it helps them to adapt to new environments. ClonalOrigin performs a comparative analysis of the sequences of a sample of bacterial genomes in order to reconstruct the recombination events that have taken place in their ancestry.

There are three methods to install clonalorigin on Kali Linux. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.

Install clonalorigin Using apt-get

Update apt database with apt-get using the following command.

sudo apt-get update

After updating apt database, We can install clonalorigin using apt-get by running the following command:

sudo apt-get -y install clonalorigin

Install clonalorigin Using apt

Update apt database with apt using the following command.

sudo apt update

After updating apt database, We can install clonalorigin using apt by running the following command:

sudo apt -y install clonalorigin

Install clonalorigin Using aptitude

If you want to follow this method, you might need to install aptitude on Kali Linux first since aptitude is usually not installed by default on Kali Linux. Update apt database with aptitude using the following command.

sudo aptitude update

After updating apt database, We can install clonalorigin using aptitude by running the following command:

sudo aptitude -y install clonalorigin

How To Uninstall clonalorigin on Kali Linux

To uninstall only the clonalorigin package we can use the following command:

sudo apt-get remove clonalorigin

Uninstall clonalorigin And Its Dependencies

To uninstall clonalorigin and its dependencies that are no longer needed by Kali Linux, we can use the command below:

sudo apt-get -y autoremove clonalorigin

Remove clonalorigin Configurations and Data

To remove clonalorigin configuration and data from Kali Linux we can use the following command:

sudo apt-get -y purge clonalorigin

Remove clonalorigin configuration, data, and all of its dependencies

We can use the following command to remove clonalorigin configurations, data and all of its dependencies, we can use the following command:

sudo apt-get -y autoremove --purge clonalorigin

Dependencies

clonalorigin have the following dependencies:

• libc6
• libgcc-s1
• libgsl25
• libstdc++6

References

• clonalorigin website

Summary

In this tutorial we learn how to install clonalorigin package on Kali Linux using different package management tools: apt, apt-get and aptitude.