How To Install circlator on Debian 12
Introduction
In this tutorial we learn how to install circlator on Debian 12.
What is circlator
circlator is:
Circlator is a tool to automate assembly circularization for bacterial and small eukaryotic genomes and produce accurate linear representations of circular sequences.
There are three methods to install circlator on Debian 12. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install circlator Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get update
After updating apt database, We can install circlator using apt-get by running the following command:
sudo apt-get -y install circlator
Install circlator Using apt
Update apt database with apt using the following command.
sudo apt update
After updating apt database, We can install circlator using apt by running the following command:
sudo apt -y install circlator
Install circlator Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude using the following command.
sudo aptitude update
After updating apt database, We can install circlator using aptitude by running the following command:
sudo aptitude -y install circlator
How To Uninstall circlator on Debian 12
To uninstall only the circlator package we can use the following command:
sudo apt-get remove circlator
Uninstall circlator And Its Dependencies
To uninstall circlator and its dependencies that are no longer needed by Debian 12, we can use the command below:
sudo apt-get -y autoremove circlator
Remove circlator Configurations and Data
To remove circlator configuration and data from Debian 12 we can use the following command:
sudo apt-get -y purge circlator
Remove circlator configuration, data, and all of its dependencies
We can use the following command to remove circlator configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge circlator
Dependencies
circlator have the following dependencies:
References
Summary
In this tutorial we learn how to install circlator package on Debian 12 using different package management tools: apt, apt-get and aptitude.