How To Install biosyntax-common on Debian 10
Introduction
In this tutorial we learn how to install biosyntax-common on Debian 10.
What is biosyntax-common
biosyntax-common is:
Syntax highlighting for computational biology to bring you intuitively close to your data. BioSyntax supports .sam, .flagstat, .vcf, .fasta, .fastq, .faidx , .clustal, .pdb, .gtf, .bed files & more.
This package provides common files of bioSyntax.
There are three methods to install biosyntax-common on Debian 10. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install biosyntax-common Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get update
After updating apt database, We can install biosyntax-common using apt-get by running the following command:
sudo apt-get -y install biosyntax-common
Install biosyntax-common Using apt
Update apt database with apt using the following command.
sudo apt update
After updating apt database, We can install biosyntax-common using apt by running the following command:
sudo apt -y install biosyntax-common
Install biosyntax-common Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude using the following command.
sudo aptitude update
After updating apt database, We can install biosyntax-common using aptitude by running the following command:
sudo aptitude -y install biosyntax-common
How To Uninstall biosyntax-common on Debian 10
To uninstall only the biosyntax-common package we can use the following command:
sudo apt-get remove biosyntax-common
Uninstall biosyntax-common And Its Dependencies
To uninstall biosyntax-common and its dependencies that are no longer needed by Debian 10, we can use the command below:
sudo apt-get -y autoremove biosyntax-common
Remove biosyntax-common Configurations and Data
To remove biosyntax-common configuration and data from Debian 10 we can use the following command:
sudo apt-get -y purge biosyntax-common
Remove biosyntax-common configuration, data, and all of its dependencies
We can use the following command to remove biosyntax-common configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge biosyntax-common
Dependencies
biosyntax-common have the following dependencies:
References
Summary
In this tutorial we learn how to install biosyntax-common package on Debian 10 using different package management tools: apt, apt-get and aptitude.