How To Install bio-eagle-examples on Kali Linux

Introduction

In this tutorial we learn how to install bio-eagle-examples on Kali Linux.

What is bio-eagle-examples

bio-eagle-examples is:

Eagle estimates haplotype phase either within a genotyped cohort or using a phased reference panel. The basic idea of the Eagle1 algorithm is to harness identity-by-descent among distant relatives??which is pervasive at very large sample sizes but rare among smaller numbers of samples??to rapidly call phase using a fast scoring approach. In contrast, the Eagle2 algorithm analyzes a full probabilistic model similar to the diploid Li-Stephens model used by previous HMM-based methods.

This package provides some example data for eagle.

There are three methods to install bio-eagle-examples on Kali Linux. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.

Install bio-eagle-examples Using apt-get

Update apt database with apt-get using the following command.

sudo apt-get update

After updating apt database, We can install bio-eagle-examples using apt-get by running the following command:

sudo apt-get -y install bio-eagle-examples

Install bio-eagle-examples Using apt

Update apt database with apt using the following command.

sudo apt update

After updating apt database, We can install bio-eagle-examples using apt by running the following command:

sudo apt -y install bio-eagle-examples

Install bio-eagle-examples Using aptitude

If you want to follow this method, you might need to install aptitude on Kali Linux first since aptitude is usually not installed by default on Kali Linux. Update apt database with aptitude using the following command.

sudo aptitude update

After updating apt database, We can install bio-eagle-examples using aptitude by running the following command:

sudo aptitude -y install bio-eagle-examples

How To Uninstall bio-eagle-examples on Kali Linux

To uninstall only the bio-eagle-examples package we can use the following command:

sudo apt-get remove bio-eagle-examples

Uninstall bio-eagle-examples And Its Dependencies

To uninstall bio-eagle-examples and its dependencies that are no longer needed by Kali Linux, we can use the command below:

sudo apt-get -y autoremove bio-eagle-examples

Remove bio-eagle-examples Configurations and Data

To remove bio-eagle-examples configuration and data from Kali Linux we can use the following command:

sudo apt-get -y purge bio-eagle-examples

Remove bio-eagle-examples configuration, data, and all of its dependencies

We can use the following command to remove bio-eagle-examples configurations, data and all of its dependencies, we can use the following command:

sudo apt-get -y autoremove --purge bio-eagle-examples

Dependencies

bio-eagle-examples have the following dependencies:

References

• bio-eagle-examples website

Summary

In this tutorial we learn how to install bio-eagle-examples package on Kali Linux using different package management tools: apt, apt-get and aptitude.