How To Install beast-mcmc-examples on Debian 10
Introduction
In this tutorial we learn how to install beast-mcmc-examples on Debian 10.
What is beast-mcmc-examples
beast-mcmc-examples is:
BEAST is a cross-platform program for Bayesian MCMC analysis of molecular sequences. It is entirely orientated towards rooted, time-measured phylogenies inferred using strict or relaxed molecular clock models. It can be used as a method of reconstructing phylogenies but is also a framework for testing evolutionary hypotheses without conditioning on a single tree topology. BEAST uses MCMC to average over tree space, so that each tree is weighted proportional to its posterior probability. Included is a simple to use user-interface program for setting up standard analyses and a suit of programs for analysing the results.
This package contains the example data.
There are three methods to install beast-mcmc-examples on Debian 10. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install beast-mcmc-examples Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get update
After updating apt database, We can install beast-mcmc-examples using apt-get by running the following command:
sudo apt-get -y install beast-mcmc-examples
Install beast-mcmc-examples Using apt
Update apt database with apt using the following command.
sudo apt update
After updating apt database, We can install beast-mcmc-examples using apt by running the following command:
sudo apt -y install beast-mcmc-examples
Install beast-mcmc-examples Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude using the following command.
sudo aptitude update
After updating apt database, We can install beast-mcmc-examples using aptitude by running the following command:
sudo aptitude -y install beast-mcmc-examples
How To Uninstall beast-mcmc-examples on Debian 10
To uninstall only the beast-mcmc-examples package we can use the following command:
sudo apt-get remove beast-mcmc-examples
Uninstall beast-mcmc-examples And Its Dependencies
To uninstall beast-mcmc-examples and its dependencies that are no longer needed by Debian 10, we can use the command below:
sudo apt-get -y autoremove beast-mcmc-examples
Remove beast-mcmc-examples Configurations and Data
To remove beast-mcmc-examples configuration and data from Debian 10 we can use the following command:
sudo apt-get -y purge beast-mcmc-examples
Remove beast-mcmc-examples configuration, data, and all of its dependencies
We can use the following command to remove beast-mcmc-examples configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge beast-mcmc-examples
Dependencies
beast-mcmc-examples have the following dependencies:
References
Summary
In this tutorial we learn how to install beast-mcmc-examples package on Debian 10 using different package management tools: apt, apt-get and aptitude.