How To Install alter-sequence-alignment on Ubuntu 22.04

In this tutorial we learn how to install alter-sequence-alignment on Ubuntu 22.04. alter-sequence-alignment is genomic sequences ALignment Transformation EnviRonment

Introduction

In this tutorial we learn how to install alter-sequence-alignment on Ubuntu 22.04.

What is alter-sequence-alignment

alter-sequence-alignment is:

ALTER (ALignment Transformation EnviRonment) is a tool to transform between multiple sequence alignment formats. ALTER focuses on the specifications of mainstream alignment and analysis programs rather than on the conversion among more or less specific formats.

There are three methods to install alter-sequence-alignment on Ubuntu 22.04. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.

Install alter-sequence-alignment Using apt-get

Update apt database with apt-get using the following command.

sudo apt-get update

After updating apt database, We can install alter-sequence-alignment using apt-get by running the following command:

sudo apt-get -y install alter-sequence-alignment

Install alter-sequence-alignment Using apt

Update apt database with apt using the following command.

sudo apt update

After updating apt database, We can install alter-sequence-alignment using apt by running the following command:

sudo apt -y install alter-sequence-alignment

Install alter-sequence-alignment Using aptitude

If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Ubuntu. Update apt database with aptitude using the following command.

sudo aptitude update

After updating apt database, We can install alter-sequence-alignment using aptitude by running the following command:

sudo aptitude -y install alter-sequence-alignment

How To Uninstall alter-sequence-alignment on Ubuntu 22.04

To uninstall only the alter-sequence-alignment package we can use the following command:

sudo apt-get remove alter-sequence-alignment

Uninstall alter-sequence-alignment And Its Dependencies

To uninstall alter-sequence-alignment and its dependencies that are no longer needed by Ubuntu 22.04, we can use the command below:

sudo apt-get -y autoremove alter-sequence-alignment

Remove alter-sequence-alignment Configurations and Data

To remove alter-sequence-alignment configuration and data from Ubuntu 22.04 we can use the following command:

sudo apt-get -y purge alter-sequence-alignment

Remove alter-sequence-alignment configuration, data, and all of its dependencies

We can use the following command to remove alter-sequence-alignment configurations, data and all of its dependencies, we can use the following command:

sudo apt-get -y autoremove --purge alter-sequence-alignment

References

Summary

In this tutorial we learn how to install alter-sequence-alignment package on Ubuntu 22.04 using different package management tools: apt, apt-get and aptitude.