How To Install seqan2-examples on Fedora 36
In this tutorial we learn how to install seqan2-examples in Fedora 36. seqan2-examples is SeqAn (2.x.x) examples
Introduction
In this tutorial we learn how to install seqan2-examples on Fedora 36.
What is seqan2-examples
Testing files of SeqAn2’s apps.
We can use yum or dnf to install seqan2-examples on Fedora 36. In this tutorial we discuss both methods but you only need to choose one of method to install seqan2-examples.
Install seqan2-examples on Fedora 36 Using dnf
Update yum database with dnf using the following command.
sudo dnf makecache --refresh
After updating yum database, We can install seqan2-examples using dnf by running the following command:
sudo dnf -y install seqan2-examples
Install seqan2-examples on Fedora 36 Using yum
Update yum database with yum using the following command.
sudo yum makecache --refresh
After updating yum database, We can install seqan2-examples using yum by running the following command:
sudo yum -y install seqan2-examples
How To Uninstall seqan2-examples on Fedora 36
To uninstall only the seqan2-examples package we can use the following command:
sudo dnf remove seqan2-examples
seqan2-examples Package Contents on Fedora 36
/usr/libexec/seqan2
/usr/libexec/seqan2/examples
/usr/libexec/seqan2/examples/alf
/usr/libexec/seqan2/examples/alf/README
/usr/libexec/seqan2/examples/alf/example
/usr/libexec/seqan2/examples/alf/example/small.fasta
/usr/libexec/seqan2/examples/bs_tools
/usr/libexec/seqan2/examples/bs_tools/README
/usr/libexec/seqan2/examples/dfi
/usr/libexec/seqan2/examples/dfi/README
/usr/libexec/seqan2/examples/dfi/example
/usr/libexec/seqan2/examples/dfi/example/fasta1.fa
/usr/libexec/seqan2/examples/dfi/example/fasta2.fa
/usr/libexec/seqan2/examples/fiona
/usr/libexec/seqan2/examples/fiona/README
/usr/libexec/seqan2/examples/fiona/example
/usr/libexec/seqan2/examples/fiona/example/reads.fa
/usr/libexec/seqan2/examples/fx_tools
/usr/libexec/seqan2/examples/fx_tools/README
/usr/libexec/seqan2/examples/gustaf
/usr/libexec/seqan2/examples/gustaf/README
/usr/libexec/seqan2/examples/gustaf/example
/usr/libexec/seqan2/examples/gustaf/example/adeno.fa
/usr/libexec/seqan2/examples/gustaf/example/adeno_modified.fa
/usr/libexec/seqan2/examples/gustaf/example/adeno_modified_reads.fa
/usr/libexec/seqan2/examples/gustaf/example/stellar.gff
/usr/libexec/seqan2/examples/insegt
/usr/libexec/seqan2/examples/insegt/README
/usr/libexec/seqan2/examples/insegt/example
/usr/libexec/seqan2/examples/insegt/example/annoOutput.gff
/usr/libexec/seqan2/examples/insegt/example/annotations.gff
/usr/libexec/seqan2/examples/insegt/example/readOutput.gff
/usr/libexec/seqan2/examples/insegt/example/tupleOutput.gff
/usr/libexec/seqan2/examples/mason2
/usr/libexec/seqan2/examples/mason2/README
/usr/libexec/seqan2/examples/mason2/README.mason_frag_sequencing
/usr/libexec/seqan2/examples/mason2/README.mason_genome
/usr/libexec/seqan2/examples/mason2/README.mason_materializer
/usr/libexec/seqan2/examples/mason2/README.mason_methylation
/usr/libexec/seqan2/examples/mason2/README.mason_simulator
/usr/libexec/seqan2/examples/mason2/README.mason_splicing
/usr/libexec/seqan2/examples/mason2/README.mason_variator
/usr/libexec/seqan2/examples/mason2/example
/usr/libexec/seqan2/examples/mason2/example/adeno_virus.fa
/usr/libexec/seqan2/examples/micro_razers
/usr/libexec/seqan2/examples/micro_razers/README
/usr/libexec/seqan2/examples/micro_razers/example
/usr/libexec/seqan2/examples/micro_razers/example/genome.fa
/usr/libexec/seqan2/examples/micro_razers/example/reads.fa
/usr/libexec/seqan2/examples/micro_razers/example/reads.fa.result
/usr/libexec/seqan2/examples/ngs_roi
/usr/libexec/seqan2/examples/ngs_roi/README
/usr/libexec/seqan2/examples/ngs_roi/example
/usr/libexec/seqan2/examples/ngs_roi/example/dmel.bed
/usr/libexec/seqan2/examples/ngs_roi/example/dmel.gtf
/usr/libexec/seqan2/examples/ngs_roi/example/example.bam
/usr/libexec/seqan2/examples/pair_align
/usr/libexec/seqan2/examples/pair_align/README
/usr/libexec/seqan2/examples/param_chooser
/usr/libexec/seqan2/examples/param_chooser/README
/usr/libexec/seqan2/examples/rabema
/usr/libexec/seqan2/examples/rabema/README
/usr/libexec/seqan2/examples/razers
/usr/libexec/seqan2/examples/razers/README
/usr/libexec/seqan2/examples/razers/example
/usr/libexec/seqan2/examples/razers/example/genome.fa
/usr/libexec/seqan2/examples/razers/example/reads.fa
/usr/libexec/seqan2/examples/razers/example/reads2.fa
/usr/libexec/seqan2/examples/razers3
/usr/libexec/seqan2/examples/razers3/README
/usr/libexec/seqan2/examples/razers3/example
/usr/libexec/seqan2/examples/razers3/example/genome.fa
/usr/libexec/seqan2/examples/razers3/example/reads.fa
/usr/libexec/seqan2/examples/razers3/example/reads2.fa
/usr/libexec/seqan2/examples/rep_sep
/usr/libexec/seqan2/examples/rep_sep/README
/usr/libexec/seqan2/examples/sak
/usr/libexec/seqan2/examples/sak/README
/usr/libexec/seqan2/examples/sak/README.sak.txt
/usr/libexec/seqan2/examples/sam2matrix
/usr/libexec/seqan2/examples/sam2matrix/README
/usr/libexec/seqan2/examples/samcat
/usr/libexec/seqan2/examples/samcat/README
/usr/libexec/seqan2/examples/searchjoin
/usr/libexec/seqan2/examples/searchjoin/README
/usr/libexec/seqan2/examples/seqan_tcoffee
/usr/libexec/seqan2/examples/seqan_tcoffee/README
/usr/libexec/seqan2/examples/seqan_tcoffee/example
/usr/libexec/seqan2/examples/seqan_tcoffee/example/seq.fa
/usr/libexec/seqan2/examples/seqcons2
/usr/libexec/seqan2/examples/seqcons2/README
/usr/libexec/seqan2/examples/sgip
/usr/libexec/seqan2/examples/sgip/README
/usr/libexec/seqan2/examples/sgip/example
/usr/libexec/seqan2/examples/sgip/example/iso_m2D_m196.A01
/usr/libexec/seqan2/examples/sgip/example/iso_r01_m200.A00
/usr/libexec/seqan2/examples/sgip/example/iso_r01_m200.A01
/usr/libexec/seqan2/examples/sgip/example/iso_r01_m200.B00
/usr/libexec/seqan2/examples/sgip/example/iso_r01_m200.B01
/usr/libexec/seqan2/examples/sgip/example/latin-4
/usr/libexec/seqan2/examples/sgip/example/lattice-4
/usr/libexec/seqan2/examples/sgip/example/sts-7
/usr/libexec/seqan2/examples/snp_store
/usr/libexec/seqan2/examples/snp_store/README
/usr/libexec/seqan2/examples/snp_store/example
/usr/libexec/seqan2/examples/snp_store/example/exampleGenome.fa
/usr/libexec/seqan2/examples/snp_store/example/exampleReads.gff
/usr/libexec/seqan2/examples/splazers
/usr/libexec/seqan2/examples/splazers/README
/usr/libexec/seqan2/examples/splazers/example
/usr/libexec/seqan2/examples/splazers/example/genome.fa
/usr/libexec/seqan2/examples/splazers/example/reads.fa
/usr/libexec/seqan2/examples/splazers/example/reads.fa.result
/usr/libexec/seqan2/examples/stellar
/usr/libexec/seqan2/examples/stellar/README
/usr/libexec/seqan2/examples/stellar/example
/usr/libexec/seqan2/examples/stellar/example/NC_001474.fasta
/usr/libexec/seqan2/examples/stellar/example/NC_001477.fasta
/usr/libexec/seqan2/examples/stellar/example/reads.fasta
/usr/libexec/seqan2/examples/tree_recon
/usr/libexec/seqan2/examples/tree_recon/README
/usr/libexec/seqan2/examples/tree_recon/example
/usr/libexec/seqan2/examples/tree_recon/example/example.dist
/usr/libexec/seqan2/examples/yara
/usr/libexec/seqan2/examples/yara/README.rst
References
Summary
In this tutorial we learn how to install seqan2-examples on Fedora 36 using yum and [dnf]((/fedora/36/dnf/).
