How To Install refmac-dictionary on Fedora 36

In this tutorial we learn how to install refmac-dictionary in Fedora 36. refmac-dictionary is Refmac ligand dictionaries

Introduction

In this tutorial we learn how to install refmac-dictionary on Fedora 36.

What is `refmac-dictionary`

The refmac ligand dictionaries contain chemical information on a large number of molecules, including the chemical structure of the ligand, the tree-like structure, the links between ligands, and possible modifications to them. This information is stored in the mmCIF format, which is used by a number of molecular viewing, refinement and validation tools.

We can use yum or dnf to install refmac-dictionary on Fedora 36. In this tutorial we discuss both methods but you only need to choose one of method to install refmac-dictionary.

Install refmac-dictionary on Fedora 36 Using dnf

Update yum database with dnf using the following command.

sudo dnf makecache --refresh

After updating yum database, We can install refmac-dictionary using dnf by running the following command:

sudo dnf -y install refmac-dictionary

Install refmac-dictionary on Fedora 36 Using yum

Update yum database with yum using the following command.

sudo yum makecache --refresh

After updating yum database, We can install refmac-dictionary using yum by running the following command:

sudo yum -y install refmac-dictionary

How To Uninstall refmac-dictionary on Fedora 36

To uninstall only the refmac-dictionary package we can use the following command:

sudo dnf remove refmac-dictionary

refmac-dictionary Package Contents on Fedora 36

/usr/share/doc/refmac-dictionary
/usr/share/doc/refmac-dictionary/COPYING
/usr/share/doc/refmac-dictionary/bug_fixes.html
/usr/share/refmac-dictionary-5.41
/usr/share/refmac-dictionary-5.41/data
/usr/share/refmac-dictionary-5.41/data/monomers
/usr/share/refmac-dictionary-5.41/data/monomers/0
/usr/share/refmac-dictionary-5.41/data/monomers/0/000.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/001.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/002.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/003.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/004.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/005.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/006.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/007.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/008.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/009.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/00A.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/00B.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/00C.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/00G.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/012.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/017.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/018.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/01A.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/01G.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/01I.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/01K.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/01W.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/020.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/023.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/024.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/028.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/031.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/032.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/033.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/039.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/03R.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/041.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/042.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/047.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/055.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/057.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/059.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/061.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/062.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/064.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/065.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/066.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/068.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/069.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/06C.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/071.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/072.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/073.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/074.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/075.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/077.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/084.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/088.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/090.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/093.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/094.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/096.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/097.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/098.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/099.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/0A0.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/0A1.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/0A2.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/0A3.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/0A4.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/0A5.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/0A6.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/0A7.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/0A8.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/0A9.cif
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/usr/share/refmac-dictionary-5.41/data/monomers/0/0AF.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/0AG.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/0AH.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/0AI.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/0AJ.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/0AK.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/0AO.cif
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/usr/share/refmac-dictionary-5.41/data/monomers/0/0CP.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/0CR.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/0CS.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/0D5.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/0DC.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/0DG.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/0DT.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/0E2.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/0E3.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/0E4.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/0EZ.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/0FA.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/0G.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/0G6.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/0HG.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/0IN.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/0JZ.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/0LI.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/0MA.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/0MO.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/0NC.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/0PA.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/0PJ.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/0PN.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/0PQ.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/0PY.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/0U.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/0UN.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/0YG.cif
/usr/share/refmac-dictionary-5.41/data/monomers/0/0Z6.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1
/usr/share/refmac-dictionary-5.41/data/monomers/1/100.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1/101.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1/102.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1/103.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1/104.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1/105.cif
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/usr/share/refmac-dictionary-5.41/data/monomers/1/107.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1/108.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1/109.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1/10A.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1/10C.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1/10F.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1/10M.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1/10U.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1/110.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1/111.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1/112.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1/113.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1/114.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1/115.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1/116.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1/117.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1/118.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1/11B.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1/11F.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1/11M.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1/11N.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1/11O.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1/11P.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1/11R.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1/11S.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1/11U.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1/11X.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1/120.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1/121.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1/122.cif
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/usr/share/refmac-dictionary-5.41/data/monomers/1/124.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1/125.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1/126.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1/127.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1/128.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1/129.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1/12A.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1/12B.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1/12C.cif
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/usr/share/refmac-dictionary-5.41/data/monomers/1/12P.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1/12Q.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1/12U.cif
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/usr/share/refmac-dictionary-5.41/data/monomers/1/13Z.cif
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/usr/share/refmac-dictionary-5.41/data/monomers/1/142.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1/143.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1/144.cif
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/usr/share/refmac-dictionary-5.41/data/monomers/1/14C.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1/14H.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1/14I.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1/14O.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1/14T.cif
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/usr/share/refmac-dictionary-5.41/data/monomers/1/15P.cif
/usr/share/refmac-dictionary-5.41/data/monomers/1/15X.cif
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/usr/share/refmac-dictionary-5.41/data/monomers/z/ZFB.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZGU.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZH1.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZHH.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZHP.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZHZ.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZID.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZIG.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZIN.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZIO.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZIP.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZIT.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZK1.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZK5.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZK9.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZKD.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZLD.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZMA.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZMG.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZMO.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZMP.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZMQ.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZMR.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZN.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZNH.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZNP.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZOL.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZOP.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZP4.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZPG.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZPQ.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZPR.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZRA.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZRC.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZRG.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZS4.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZST.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZTH.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZTW.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZU3.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZU5.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZUK.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZWZ.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZX0.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZX1.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZX5.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZX6.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZX7.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZX8.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZX9.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZXA.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZXB.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZXD.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZY0.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZY1.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZY2.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZY3.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZY4.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZY5.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZY6.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZY7.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZYA.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZYE.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZYN.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZYO.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZYP.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZYQ.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZYR.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZYS.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZYT.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZYU.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZYV.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZYW.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZYX.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZYY.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZYZ.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZZ0.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZZ1.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZZ2.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZZ3.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZZ4.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZZ5.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZZ6.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZZ7.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZZ8.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZZ9.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZZA.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZZB.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZZC.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZZD.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZZE.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZZF.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZZG.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZZH.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZZI.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZZJ.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZZK.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZZL.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZZM.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZZN.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZZO.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZZP.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZZQ.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZZU.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZZV.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZZW.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZZX.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZZY.cif
/usr/share/refmac-dictionary-5.41/data/monomers/z/ZZZ.cif

References

refmac-dictionary website

Summary

In this tutorial we learn how to install refmac-dictionary on Fedora 36 using yum and [dnf]((/fedora/36/dnf/).