How To Install R-Biostrings on Fedora 36
In this tutorial we learn how to install R-Biostrings in Fedora 36. R-Biostrings is String objects representing biological sequences
Introduction
In this tutorial we learn how to install R-Biostrings on Fedora 36.
What is R-Biostrings
Memory efficient string containers, string matching algorithms, and other utilities, for fast manipulation of large biological sequences or set of sequences.
We can use yum or dnf to install R-Biostrings on Fedora 36. In this tutorial we discuss both methods but you only need to choose one of method to install R-Biostrings.
Install R-Biostrings on Fedora 36 Using dnf
Update yum database with dnf using the following command.
sudo dnf makecache --refresh
After updating yum database, We can install R-Biostrings using dnf by running the following command:
sudo dnf -y install R-Biostrings
Install R-Biostrings on Fedora 36 Using yum
Update yum database with yum using the following command.
sudo yum makecache --refresh
After updating yum database, We can install R-Biostrings using yum by running the following command:
sudo yum -y install R-Biostrings
How To Uninstall R-Biostrings on Fedora 36
To uninstall only the R-Biostrings package we can use the following command:
sudo dnf remove R-Biostrings
R-Biostrings Package Contents on Fedora 36
/usr/lib/.build-id
/usr/lib/.build-id/d0
/usr/lib/.build-id/d0/90338f34ef136095205fb8c0547fe96abdec45
/usr/lib64/R/library/Biostrings
/usr/lib64/R/library/Biostrings/DESCRIPTION
/usr/lib64/R/library/Biostrings/INDEX
/usr/lib64/R/library/Biostrings/Meta
/usr/lib64/R/library/Biostrings/Meta/Rd.rds
/usr/lib64/R/library/Biostrings/Meta/data.rds
/usr/lib64/R/library/Biostrings/Meta/features.rds
/usr/lib64/R/library/Biostrings/Meta/hsearch.rds
/usr/lib64/R/library/Biostrings/Meta/links.rds
/usr/lib64/R/library/Biostrings/Meta/nsInfo.rds
/usr/lib64/R/library/Biostrings/Meta/package.rds
/usr/lib64/R/library/Biostrings/Meta/vignette.rds
/usr/lib64/R/library/Biostrings/NAMESPACE
/usr/lib64/R/library/Biostrings/NEWS
/usr/lib64/R/library/Biostrings/R
/usr/lib64/R/library/Biostrings/R/Biostrings
/usr/lib64/R/library/Biostrings/R/Biostrings.rdb
/usr/lib64/R/library/Biostrings/R/Biostrings.rdx
/usr/lib64/R/library/Biostrings/data
/usr/lib64/R/library/Biostrings/data/BLOSUM100.rda
/usr/lib64/R/library/Biostrings/data/BLOSUM45.rda
/usr/lib64/R/library/Biostrings/data/BLOSUM50.rda
/usr/lib64/R/library/Biostrings/data/BLOSUM62.rda
/usr/lib64/R/library/Biostrings/data/BLOSUM80.rda
/usr/lib64/R/library/Biostrings/data/HNF4alpha.rda
/usr/lib64/R/library/Biostrings/data/PAM120.rda
/usr/lib64/R/library/Biostrings/data/PAM250.rda
/usr/lib64/R/library/Biostrings/data/PAM30.rda
/usr/lib64/R/library/Biostrings/data/PAM40.rda
/usr/lib64/R/library/Biostrings/data/PAM70.rda
/usr/lib64/R/library/Biostrings/data/phiX174Phage.rda
/usr/lib64/R/library/Biostrings/data/srPhiX174.rda
/usr/lib64/R/library/Biostrings/data/yeastSEQCHR1.rda
/usr/lib64/R/library/Biostrings/doc
/usr/lib64/R/library/Biostrings/doc/Biostrings2Classes.R
/usr/lib64/R/library/Biostrings/doc/Biostrings2Classes.Rnw
/usr/lib64/R/library/Biostrings/doc/Biostrings2Classes.pdf
/usr/lib64/R/library/Biostrings/doc/BiostringsQuickOverview.Rnw
/usr/lib64/R/library/Biostrings/doc/BiostringsQuickOverview.pdf
/usr/lib64/R/library/Biostrings/doc/MultipleAlignments.R
/usr/lib64/R/library/Biostrings/doc/MultipleAlignments.Rnw
/usr/lib64/R/library/Biostrings/doc/MultipleAlignments.pdf
/usr/lib64/R/library/Biostrings/doc/PairwiseAlignments.R
/usr/lib64/R/library/Biostrings/doc/PairwiseAlignments.Rnw
/usr/lib64/R/library/Biostrings/doc/PairwiseAlignments.pdf
/usr/lib64/R/library/Biostrings/doc/index.html
/usr/lib64/R/library/Biostrings/doc/matchprobes.R
/usr/lib64/R/library/Biostrings/doc/matchprobes.Rnw
/usr/lib64/R/library/Biostrings/doc/matchprobes.pdf
/usr/lib64/R/library/Biostrings/extdata
/usr/lib64/R/library/Biostrings/extdata/Phylip.txt
/usr/lib64/R/library/Biostrings/extdata/README
/usr/lib64/R/library/Biostrings/extdata/Sc.fa
/usr/lib64/R/library/Biostrings/extdata/Sp.fa
/usr/lib64/R/library/Biostrings/extdata/dm3_upstream2000.fa.gz
/usr/lib64/R/library/Biostrings/extdata/fastaEx.fa
/usr/lib64/R/library/Biostrings/extdata/hg18chr8_gap.txt
/usr/lib64/R/library/Biostrings/extdata/hg18chrY_gap.txt
/usr/lib64/R/library/Biostrings/extdata/msx2_mRNA.aln
/usr/lib64/R/library/Biostrings/extdata/s_1_sequence.txt
/usr/lib64/R/library/Biostrings/extdata/someORF.fa
/usr/lib64/R/library/Biostrings/extdata/someORF.fa.gz
/usr/lib64/R/library/Biostrings/help
/usr/lib64/R/library/Biostrings/help/+21+3D+2CBString+2Ccharacter-method.html
/usr/lib64/R/library/Biostrings/help/+21+3D+2CXString+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/+21+3D+2CXString+2CXStringViews-method.html
/usr/lib64/R/library/Biostrings/help/+21+3D+2CXStringViews+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/+21+3D+2CXStringViews+2CXStringViews-method.html
/usr/lib64/R/library/Biostrings/help/+21+3D+2CXStringViews+2Ccharacter-method.html
/usr/lib64/R/library/Biostrings/help/+21+3D+2Ccharacter+2CBString-method.html
/usr/lib64/R/library/Biostrings/help/+21+3D+2Ccharacter+2CXStringViews-method.html
/usr/lib64/R/library/Biostrings/help/+3D+3D+2CBString+2Ccharacter-method.html
/usr/lib64/R/library/Biostrings/help/+3D+3D+2CXString+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/+3D+3D+2CXString+2CXStringViews-method.html
/usr/lib64/R/library/Biostrings/help/+3D+3D+2CXStringViews+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/+3D+3D+2CXStringViews+2CXStringViews-method.html
/usr/lib64/R/library/Biostrings/help/+3D+3D+2CXStringViews+2Ccharacter-method.html
/usr/lib64/R/library/Biostrings/help/+3D+3D+2Ccharacter+2CBString-method.html
/usr/lib64/R/library/Biostrings/help/+3D+3D+2Ccharacter+2CXStringViews-method.html
/usr/lib64/R/library/Biostrings/help/+5B+2CXStringPartialMatches-method.html
/usr/lib64/R/library/Biostrings/help/+5B+5B+2CByPos_MIndex-method.html
/usr/lib64/R/library/Biostrings/help/+5B+5B+2CPDict-method.html
/usr/lib64/R/library/Biostrings/help/+5B+5B+2CSparseList-method.html
/usr/lib64/R/library/Biostrings/help/.inplaceReplaceLetterAt.html
/usr/lib64/R/library/Biostrings/help/AAMultipleAlignment-class.html
/usr/lib64/R/library/Biostrings/help/AAMultipleAlignment.html
/usr/lib64/R/library/Biostrings/help/AAString-class.html
/usr/lib64/R/library/Biostrings/help/AAString.html
/usr/lib64/R/library/Biostrings/help/AAStringSet-class.html
/usr/lib64/R/library/Biostrings/help/AAStringSet.html
/usr/lib64/R/library/Biostrings/help/AAStringSetList-class.html
/usr/lib64/R/library/Biostrings/help/AAStringSetList.html
/usr/lib64/R/library/Biostrings/help/AA_ALPHABET.html
/usr/lib64/R/library/Biostrings/help/AA_PROTEINOGENIC.html
/usr/lib64/R/library/Biostrings/help/AA_STANDARD.html
/usr/lib64/R/library/Biostrings/help/ACtree2-class.html
/usr/lib64/R/library/Biostrings/help/ACtree2.html
/usr/lib64/R/library/Biostrings/help/AMINO_ACID_CODE.html
/usr/lib64/R/library/Biostrings/help/AlignedXStringSet-class.html
/usr/lib64/R/library/Biostrings/help/AlignedXStringSet.html
/usr/lib64/R/library/Biostrings/help/AlignedXStringSet0-class.html
/usr/lib64/R/library/Biostrings/help/AlignedXStringSet0.html
/usr/lib64/R/library/Biostrings/help/AnIndex
/usr/lib64/R/library/Biostrings/help/BLOSUM100.html
/usr/lib64/R/library/Biostrings/help/BLOSUM45.html
/usr/lib64/R/library/Biostrings/help/BLOSUM50.html
/usr/lib64/R/library/Biostrings/help/BLOSUM62.html
/usr/lib64/R/library/Biostrings/help/BLOSUM80.html
/usr/lib64/R/library/Biostrings/help/BString-class.html
/usr/lib64/R/library/Biostrings/help/BString.html
/usr/lib64/R/library/Biostrings/help/BStringSet-class.html
/usr/lib64/R/library/Biostrings/help/BStringSet.html
/usr/lib64/R/library/Biostrings/help/BStringSetList-class.html
/usr/lib64/R/library/Biostrings/help/BStringSetList.html
/usr/lib64/R/library/Biostrings/help/Biostrings-internals.html
/usr/lib64/R/library/Biostrings/help/Biostrings.rdb
/usr/lib64/R/library/Biostrings/help/Biostrings.rdx
/usr/lib64/R/library/Biostrings/help/ByPos_MIndex-class.html
/usr/lib64/R/library/Biostrings/help/DNAMultipleAlignment-class.html
/usr/lib64/R/library/Biostrings/help/DNAMultipleAlignment.html
/usr/lib64/R/library/Biostrings/help/DNAString-class.html
/usr/lib64/R/library/Biostrings/help/DNAString.html
/usr/lib64/R/library/Biostrings/help/DNAStringSet-class.html
/usr/lib64/R/library/Biostrings/help/DNAStringSet.html
/usr/lib64/R/library/Biostrings/help/DNAStringSetList-class.html
/usr/lib64/R/library/Biostrings/help/DNAStringSetList.html
/usr/lib64/R/library/Biostrings/help/DNA_ALPHABET.html
/usr/lib64/R/library/Biostrings/help/DNA_BASES.html
/usr/lib64/R/library/Biostrings/help/Expanded_TB_PDict-class.html
/usr/lib64/R/library/Biostrings/help/Expanded_TB_PDict.html
/usr/lib64/R/library/Biostrings/help/GENETIC_CODE.html
/usr/lib64/R/library/Biostrings/help/GENETIC_CODE_TABLE.html
/usr/lib64/R/library/Biostrings/help/HNF4alpha.html
/usr/lib64/R/library/Biostrings/help/IUPAC_CODE_MAP.html
/usr/lib64/R/library/Biostrings/help/IlluminaQuality-class.html
/usr/lib64/R/library/Biostrings/help/IlluminaQuality.html
/usr/lib64/R/library/Biostrings/help/InDel-class.html
/usr/lib64/R/library/Biostrings/help/InDel.html
/usr/lib64/R/library/Biostrings/help/MIndex-class.html
/usr/lib64/R/library/Biostrings/help/MIndex.html
/usr/lib64/R/library/Biostrings/help/MTB_PDict-class.html
/usr/lib64/R/library/Biostrings/help/MTB_PDict.html
/usr/lib64/R/library/Biostrings/help/MaskedAAString-class.html
/usr/lib64/R/library/Biostrings/help/MaskedAAString.html
/usr/lib64/R/library/Biostrings/help/MaskedBString-class.html
/usr/lib64/R/library/Biostrings/help/MaskedBString.html
/usr/lib64/R/library/Biostrings/help/MaskedDNAString-class.html
/usr/lib64/R/library/Biostrings/help/MaskedDNAString.html
/usr/lib64/R/library/Biostrings/help/MaskedRNAString-class.html
/usr/lib64/R/library/Biostrings/help/MaskedRNAString.html
/usr/lib64/R/library/Biostrings/help/MaskedXString-class.html
/usr/lib64/R/library/Biostrings/help/MaskedXString.html
/usr/lib64/R/library/Biostrings/help/MultipleAlignment-class.html
/usr/lib64/R/library/Biostrings/help/MultipleAlignment.html
/usr/lib64/R/library/Biostrings/help/N50.html
/usr/lib64/R/library/Biostrings/help/PAM120.html
/usr/lib64/R/library/Biostrings/help/PAM250.html
/usr/lib64/R/library/Biostrings/help/PAM30.html
/usr/lib64/R/library/Biostrings/help/PAM40.html
/usr/lib64/R/library/Biostrings/help/PAM70.html
/usr/lib64/R/library/Biostrings/help/PDict+2CAsIs-method.html
/usr/lib64/R/library/Biostrings/help/PDict+2CDNAStringSet-method.html
/usr/lib64/R/library/Biostrings/help/PDict+2CXStringViews-method.html
/usr/lib64/R/library/Biostrings/help/PDict+2Ccharacter-method.html
/usr/lib64/R/library/Biostrings/help/PDict+2Cprobetable-method.html
/usr/lib64/R/library/Biostrings/help/PDict-class.html
/usr/lib64/R/library/Biostrings/help/PDict.html
/usr/lib64/R/library/Biostrings/help/PDict3Parts-class.html
/usr/lib64/R/library/Biostrings/help/PDict3Parts.html
/usr/lib64/R/library/Biostrings/help/PWM+2CDNAStringSet-method.html
/usr/lib64/R/library/Biostrings/help/PWM+2Ccharacter-method.html
/usr/lib64/R/library/Biostrings/help/PWM+2Cmatrix-method.html
/usr/lib64/R/library/Biostrings/help/PWM.html
/usr/lib64/R/library/Biostrings/help/PWMscoreStartingAt.html
/usr/lib64/R/library/Biostrings/help/PairwiseAlignments+2CXString+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/PairwiseAlignments+2CXStringSet+2Cmissing-method.html
/usr/lib64/R/library/Biostrings/help/PairwiseAlignments+2Ccharacter+2Ccharacter-method.html
/usr/lib64/R/library/Biostrings/help/PairwiseAlignments+2Ccharacter+2Cmissing-method.html
/usr/lib64/R/library/Biostrings/help/PairwiseAlignments-class.html
/usr/lib64/R/library/Biostrings/help/PairwiseAlignments-io.html
/usr/lib64/R/library/Biostrings/help/PairwiseAlignments.html
/usr/lib64/R/library/Biostrings/help/PairwiseAlignmentsSingleSubject+2CXString+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/PairwiseAlignmentsSingleSubject+2CXStringSet+2Cmissing-method.html
/usr/lib64/R/library/Biostrings/help/PairwiseAlignmentsSingleSubject+2Ccharacter+2Ccharacter-method.html
/usr/lib64/R/library/Biostrings/help/PairwiseAlignmentsSingleSubject+2Ccharacter+2Cmissing-method.html
/usr/lib64/R/library/Biostrings/help/PairwiseAlignmentsSingleSubject-class.html
/usr/lib64/R/library/Biostrings/help/PairwiseAlignmentsSingleSubject.html
/usr/lib64/R/library/Biostrings/help/PairwiseAlignmentsSingleSubjectSummary-class.html
/usr/lib64/R/library/Biostrings/help/PairwiseAlignmentsSingleSubjectSummary.html
/usr/lib64/R/library/Biostrings/help/PhredQuality-class.html
/usr/lib64/R/library/Biostrings/help/PhredQuality.html
/usr/lib64/R/library/Biostrings/help/PreprocessedTB-class.html
/usr/lib64/R/library/Biostrings/help/PreprocessedTB.html
/usr/lib64/R/library/Biostrings/help/QualityAlignedXStringSet-class.html
/usr/lib64/R/library/Biostrings/help/QualityAlignedXStringSet.html
/usr/lib64/R/library/Biostrings/help/QualityScaledAAStringSet-class.html
/usr/lib64/R/library/Biostrings/help/QualityScaledAAStringSet.html
/usr/lib64/R/library/Biostrings/help/QualityScaledBStringSet-class.html
/usr/lib64/R/library/Biostrings/help/QualityScaledBStringSet.html
/usr/lib64/R/library/Biostrings/help/QualityScaledDNAStringSet-class.html
/usr/lib64/R/library/Biostrings/help/QualityScaledDNAStringSet.html
/usr/lib64/R/library/Biostrings/help/QualityScaledRNAStringSet-class.html
/usr/lib64/R/library/Biostrings/help/QualityScaledRNAStringSet.html
/usr/lib64/R/library/Biostrings/help/QualityScaledXStringSet-class.html
/usr/lib64/R/library/Biostrings/help/QualityScaledXStringSet.html
/usr/lib64/R/library/Biostrings/help/RNAMultipleAlignment-class.html
/usr/lib64/R/library/Biostrings/help/RNAMultipleAlignment.html
/usr/lib64/R/library/Biostrings/help/RNAString-class.html
/usr/lib64/R/library/Biostrings/help/RNAString.html
/usr/lib64/R/library/Biostrings/help/RNAStringSet-class.html
/usr/lib64/R/library/Biostrings/help/RNAStringSet.html
/usr/lib64/R/library/Biostrings/help/RNAStringSetList-class.html
/usr/lib64/R/library/Biostrings/help/RNAStringSetList.html
/usr/lib64/R/library/Biostrings/help/RNA_ALPHABET.html
/usr/lib64/R/library/Biostrings/help/RNA_BASES.html
/usr/lib64/R/library/Biostrings/help/RNA_GENETIC_CODE.html
/usr/lib64/R/library/Biostrings/help/SolexaQuality-class.html
/usr/lib64/R/library/Biostrings/help/SolexaQuality.html
/usr/lib64/R/library/Biostrings/help/SparseList-class.html
/usr/lib64/R/library/Biostrings/help/SparseList.html
/usr/lib64/R/library/Biostrings/help/TB_PDict-class.html
/usr/lib64/R/library/Biostrings/help/TB_PDict.html
/usr/lib64/R/library/Biostrings/help/Twobit-class.html
/usr/lib64/R/library/Biostrings/help/Twobit.html
/usr/lib64/R/library/Biostrings/help/Views+2CMaskedXString-method.html
/usr/lib64/R/library/Biostrings/help/Views+2CPairwiseAlignmentsSingleSubject-method.html
/usr/lib64/R/library/Biostrings/help/Views+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/Views+2Ccharacter-method.html
/usr/lib64/R/library/Biostrings/help/XString-class.html
/usr/lib64/R/library/Biostrings/help/XString.html
/usr/lib64/R/library/Biostrings/help/XStringCodec-class.html
/usr/lib64/R/library/Biostrings/help/XStringCodec.html
/usr/lib64/R/library/Biostrings/help/XStringPartialMatches-class.html
/usr/lib64/R/library/Biostrings/help/XStringQuality-class.html
/usr/lib64/R/library/Biostrings/help/XStringQuality.html
/usr/lib64/R/library/Biostrings/help/XStringSet-class.html
/usr/lib64/R/library/Biostrings/help/XStringSet-comparison.html
/usr/lib64/R/library/Biostrings/help/XStringSet-io.html
/usr/lib64/R/library/Biostrings/help/XStringSet.html
/usr/lib64/R/library/Biostrings/help/XStringSetList-class.html
/usr/lib64/R/library/Biostrings/help/XStringSetList.html
/usr/lib64/R/library/Biostrings/help/XStringViews-class.html
/usr/lib64/R/library/Biostrings/help/XStringViews.html
/usr/lib64/R/library/Biostrings/help/aliases.rds
/usr/lib64/R/library/Biostrings/help/align-utils.html
/usr/lib64/R/library/Biostrings/help/aligned+2CAlignedXStringSet0-method.html
/usr/lib64/R/library/Biostrings/help/aligned+2CPairwiseAlignmentsSingleSubject-method.html
/usr/lib64/R/library/Biostrings/help/aligned.html
/usr/lib64/R/library/Biostrings/help/alignedPattern+2CPairwiseAlignments-method.html
/usr/lib64/R/library/Biostrings/help/alignedPattern.html
/usr/lib64/R/library/Biostrings/help/alignedSubject+2CPairwiseAlignments-method.html
/usr/lib64/R/library/Biostrings/help/alignedSubject.html
/usr/lib64/R/library/Biostrings/help/alphabet+2CANY-method.html
/usr/lib64/R/library/Biostrings/help/alphabet+2CXStringQuality-method.html
/usr/lib64/R/library/Biostrings/help/alphabet.html
/usr/lib64/R/library/Biostrings/help/alphabetFrequency+2CAAString-method.html
/usr/lib64/R/library/Biostrings/help/alphabetFrequency+2CAAStringSet-method.html
/usr/lib64/R/library/Biostrings/help/alphabetFrequency+2CDNAString-method.html
/usr/lib64/R/library/Biostrings/help/alphabetFrequency+2CDNAStringSet-method.html
/usr/lib64/R/library/Biostrings/help/alphabetFrequency+2CMaskedXString-method.html
/usr/lib64/R/library/Biostrings/help/alphabetFrequency+2CMultipleAlignment-method.html
/usr/lib64/R/library/Biostrings/help/alphabetFrequency+2CRNAString-method.html
/usr/lib64/R/library/Biostrings/help/alphabetFrequency+2CRNAStringSet-method.html
/usr/lib64/R/library/Biostrings/help/alphabetFrequency+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/alphabetFrequency+2CXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/alphabetFrequency+2CXStringViews-method.html
/usr/lib64/R/library/Biostrings/help/alphabetFrequency.html
/usr/lib64/R/library/Biostrings/help/anyNA+2CXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/as.character+2CAlignedXStringSet0-method.html
/usr/lib64/R/library/Biostrings/help/as.character+2CMaskedXString-method.html
/usr/lib64/R/library/Biostrings/help/as.character+2CMultipleAlignment-method.html
/usr/lib64/R/library/Biostrings/help/as.character+2CPairwiseAlignmentsSingleSubject-method.html
/usr/lib64/R/library/Biostrings/help/as.character+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/as.character+2CXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/as.character+2CXStringViews-method.html
/usr/lib64/R/library/Biostrings/help/as.data.frame+2CXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/as.data.frame+2CXStringViews-method.html
/usr/lib64/R/library/Biostrings/help/as.factor+2CXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/as.list+2CMTB_PDict-method.html
/usr/lib64/R/library/Biostrings/help/as.list+2CSparseList-method.html
/usr/lib64/R/library/Biostrings/help/as.matrix+2CMultipleAlignment-method.html
/usr/lib64/R/library/Biostrings/help/as.matrix+2CPairwiseAlignmentsSingleSubject-method.html
/usr/lib64/R/library/Biostrings/help/as.matrix+2CXStringQuality-method.html
/usr/lib64/R/library/Biostrings/help/as.matrix+2CXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/as.matrix+2CXStringViews-method.html
/usr/lib64/R/library/Biostrings/help/as.vector+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/as.vector+2CXStringQuality-method.html
/usr/lib64/R/library/Biostrings/help/as.vector+2CXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/chartr+2CANY+2CANY+2CMaskedXString-method.html
/usr/lib64/R/library/Biostrings/help/chartr+2CANY+2CANY+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/chartr+2CANY+2CANY+2CXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/chartr+2CANY+2CANY+2CXStringViews-method.html
/usr/lib64/R/library/Biostrings/help/chartr.html
/usr/lib64/R/library/Biostrings/help/class+3AAAMultipleAlignment.html
/usr/lib64/R/library/Biostrings/help/class+3AAAString.html
/usr/lib64/R/library/Biostrings/help/class+3AAAStringSet.html
/usr/lib64/R/library/Biostrings/help/class+3AAAStringSetList.html
/usr/lib64/R/library/Biostrings/help/class+3AACtree2.html
/usr/lib64/R/library/Biostrings/help/class+3AAlignedXStringSet.html
/usr/lib64/R/library/Biostrings/help/class+3AAlignedXStringSet0.html
/usr/lib64/R/library/Biostrings/help/class+3ABString.html
/usr/lib64/R/library/Biostrings/help/class+3ABStringSet.html
/usr/lib64/R/library/Biostrings/help/class+3ABStringSetList.html
/usr/lib64/R/library/Biostrings/help/class+3AByPos_MIndex.html
/usr/lib64/R/library/Biostrings/help/class+3ADNAMultipleAlignment.html
/usr/lib64/R/library/Biostrings/help/class+3ADNAString.html
/usr/lib64/R/library/Biostrings/help/class+3ADNAStringSet.html
/usr/lib64/R/library/Biostrings/help/class+3ADNAStringSetList.html
/usr/lib64/R/library/Biostrings/help/class+3AExpanded_TB_PDict.html
/usr/lib64/R/library/Biostrings/help/class+3AIlluminaQuality.html
/usr/lib64/R/library/Biostrings/help/class+3AInDel.html
/usr/lib64/R/library/Biostrings/help/class+3AMIndex.html
/usr/lib64/R/library/Biostrings/help/class+3AMTB_PDict.html
/usr/lib64/R/library/Biostrings/help/class+3AMaskedAAString.html
/usr/lib64/R/library/Biostrings/help/class+3AMaskedBString.html
/usr/lib64/R/library/Biostrings/help/class+3AMaskedDNAString.html
/usr/lib64/R/library/Biostrings/help/class+3AMaskedRNAString.html
/usr/lib64/R/library/Biostrings/help/class+3AMaskedXString.html
/usr/lib64/R/library/Biostrings/help/class+3AMultipleAlignment.html
/usr/lib64/R/library/Biostrings/help/class+3APDict.html
/usr/lib64/R/library/Biostrings/help/class+3APDict3Parts.html
/usr/lib64/R/library/Biostrings/help/class+3APairwiseAlignments.html
/usr/lib64/R/library/Biostrings/help/class+3APairwiseAlignmentsSingleSubject.html
/usr/lib64/R/library/Biostrings/help/class+3APairwiseAlignmentsSingleSubjectSummary.html
/usr/lib64/R/library/Biostrings/help/class+3APhredQuality.html
/usr/lib64/R/library/Biostrings/help/class+3APreprocessedTB.html
/usr/lib64/R/library/Biostrings/help/class+3AQualityAlignedXStringSet.html
/usr/lib64/R/library/Biostrings/help/class+3AQualityScaledAAStringSet.html
/usr/lib64/R/library/Biostrings/help/class+3AQualityScaledBStringSet.html
/usr/lib64/R/library/Biostrings/help/class+3AQualityScaledDNAStringSet.html
/usr/lib64/R/library/Biostrings/help/class+3AQualityScaledRNAStringSet.html
/usr/lib64/R/library/Biostrings/help/class+3AQualityScaledXStringSet.html
/usr/lib64/R/library/Biostrings/help/class+3ARNAMultipleAlignment.html
/usr/lib64/R/library/Biostrings/help/class+3ARNAString.html
/usr/lib64/R/library/Biostrings/help/class+3ARNAStringSet.html
/usr/lib64/R/library/Biostrings/help/class+3ARNAStringSetList.html
/usr/lib64/R/library/Biostrings/help/class+3ASolexaQuality.html
/usr/lib64/R/library/Biostrings/help/class+3ASparseList.html
/usr/lib64/R/library/Biostrings/help/class+3ATB_PDict.html
/usr/lib64/R/library/Biostrings/help/class+3ATwobit.html
/usr/lib64/R/library/Biostrings/help/class+3AXString.html
/usr/lib64/R/library/Biostrings/help/class+3AXStringCodec.html
/usr/lib64/R/library/Biostrings/help/class+3AXStringPartialMatches.html
/usr/lib64/R/library/Biostrings/help/class+3AXStringQuality.html
/usr/lib64/R/library/Biostrings/help/class+3AXStringSet.html
/usr/lib64/R/library/Biostrings/help/class+3AXStringSetList.html
/usr/lib64/R/library/Biostrings/help/class+3AXStringViews.html
/usr/lib64/R/library/Biostrings/help/codons+2CDNAString-method.html
/usr/lib64/R/library/Biostrings/help/codons+2CMaskedDNAString-method.html
/usr/lib64/R/library/Biostrings/help/codons+2CMaskedRNAString-method.html
/usr/lib64/R/library/Biostrings/help/codons+2CRNAString-method.html
/usr/lib64/R/library/Biostrings/help/codons.html
/usr/lib64/R/library/Biostrings/help/coerce+2CAAString+2CMaskedAAString-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CANY+2CAAStringSet-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CANY+2CBStringSet-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CANY+2CDNAStringSet-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CANY+2CRNAStringSet-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CANY+2CXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CBString+2CIlluminaQuality-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CBString+2CMaskedBString-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CBString+2CPhredQuality-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CBString+2CSolexaQuality-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CBStringSet+2CIlluminaQuality-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CBStringSet+2CPhredQuality-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CBStringSet+2CSolexaQuality-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CDNAString+2CMaskedDNAString-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CIntegerList+2CIlluminaQuality-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CIntegerList+2CPhredQuality-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CIntegerList+2CSolexaQuality-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CMIndex+2CCompressedIRangesList-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CMaskedAAString+2CAAString-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CMaskedBString+2CBString-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CMaskedDNAString+2CDNAString-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CMaskedRNAString+2CRNAString-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CMaskedXString+2CMaskCollection-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CMaskedXString+2CMaskedAAString-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CMaskedXString+2CMaskedBString-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CMaskedXString+2CMaskedDNAString-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CMaskedXString+2CMaskedRNAString-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CMaskedXString+2CNormalIRanges-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CMaskedXString+2CViews-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CMaskedXString+2CXStringViews-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CMultipleAlignment+2CAAStringSet-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CMultipleAlignment+2CBStringSet-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CMultipleAlignment+2CDNAStringSet-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CMultipleAlignment+2CRNAStringSet-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CNumericList+2CIlluminaQuality-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CNumericList+2CPhredQuality-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CNumericList+2CSolexaQuality-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CRNAString+2CMaskedRNAString-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CXString+2CAAString-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CXString+2CBString-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CXString+2CDNAString-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CXString+2CRNAString-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CXStringQuality+2CCompressedIntegerList-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CXStringQuality+2CCompressedNumericList-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CXStringQuality+2CIntegerList-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CXStringQuality+2CNumericList-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CXStringQuality+2Cmatrix-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CXStringSet+2CViews-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CXStringSet+2CXStringViews-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CXStringViews+2CAAStringSet-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CXStringViews+2CBStringSet-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CXStringViews+2CDNAStringSet-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CXStringViews+2CRNAStringSet-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2CXStringViews+2CXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2Ccharacter+2CAAMultipleAlignment-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2Ccharacter+2CAAString-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2Ccharacter+2CBString-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2Ccharacter+2CDNAMultipleAlignment-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2Ccharacter+2CDNAString-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2Ccharacter+2CIlluminaQuality-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2Ccharacter+2CPhredQuality-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2Ccharacter+2CRNAMultipleAlignment-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2Ccharacter+2CRNAString-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2Ccharacter+2CSolexaQuality-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2Ccharacter+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2Cinteger+2CIlluminaQuality-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2Cinteger+2CPhredQuality-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2Cinteger+2CSolexaQuality-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2Cnumeric+2CIlluminaQuality-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2Cnumeric+2CPhredQuality-method.html
/usr/lib64/R/library/Biostrings/help/coerce+2Cnumeric+2CSolexaQuality-method.html
/usr/lib64/R/library/Biostrings/help/collapse+2CMaskedXString-method.html
/usr/lib64/R/library/Biostrings/help/colmask+2CMultipleAlignment-method.html
/usr/lib64/R/library/Biostrings/help/colmask+3C-+2CMultipleAlignment+2CANY-method.html
/usr/lib64/R/library/Biostrings/help/colmask+3C-+2CMultipleAlignment+2CNULL-method.html
/usr/lib64/R/library/Biostrings/help/colmask+3C-.html
/usr/lib64/R/library/Biostrings/help/colmask.html
/usr/lib64/R/library/Biostrings/help/compareStrings+2CAlignedXStringSet0+2CAlignedXStringSet0-method.html
/usr/lib64/R/library/Biostrings/help/compareStrings+2CPairwiseAlignments+2Cmissing-method.html
/usr/lib64/R/library/Biostrings/help/compareStrings+2CXString+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/compareStrings+2CXStringSet+2CXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/compareStrings+2Ccharacter+2Ccharacter-method.html
/usr/lib64/R/library/Biostrings/help/compareStrings.html
/usr/lib64/R/library/Biostrings/help/complement+2CDNAString-method.html
/usr/lib64/R/library/Biostrings/help/complement+2CDNAStringSet-method.html
/usr/lib64/R/library/Biostrings/help/complement+2CMaskedDNAString-method.html
/usr/lib64/R/library/Biostrings/help/complement+2CMaskedRNAString-method.html
/usr/lib64/R/library/Biostrings/help/complement+2CRNAString-method.html
/usr/lib64/R/library/Biostrings/help/complement+2CRNAStringSet-method.html
/usr/lib64/R/library/Biostrings/help/complement+2CXStringViews-method.html
/usr/lib64/R/library/Biostrings/help/complement.html
/usr/lib64/R/library/Biostrings/help/computeAllFlinks+2CACtree2-method.html
/usr/lib64/R/library/Biostrings/help/computeAllFlinks.html
/usr/lib64/R/library/Biostrings/help/consensusMatrix+2CMultipleAlignment-method.html
/usr/lib64/R/library/Biostrings/help/consensusMatrix+2CPairwiseAlignmentsSingleSubject-method.html
/usr/lib64/R/library/Biostrings/help/consensusMatrix+2CXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/consensusMatrix+2CXStringViews-method.html
/usr/lib64/R/library/Biostrings/help/consensusMatrix+2Ccharacter-method.html
/usr/lib64/R/library/Biostrings/help/consensusMatrix+2Cmatrix-method.html
/usr/lib64/R/library/Biostrings/help/consensusMatrix.html
/usr/lib64/R/library/Biostrings/help/consensusString+2CAAMultipleAlignment-method.html
/usr/lib64/R/library/Biostrings/help/consensusString+2CANY-method.html
/usr/lib64/R/library/Biostrings/help/consensusString+2CBStringSet-method.html
/usr/lib64/R/library/Biostrings/help/consensusString+2CDNAMultipleAlignment-method.html
/usr/lib64/R/library/Biostrings/help/consensusString+2CDNAStringSet-method.html
/usr/lib64/R/library/Biostrings/help/consensusString+2CMultipleAlignment-method.html
/usr/lib64/R/library/Biostrings/help/consensusString+2CRNAMultipleAlignment-method.html
/usr/lib64/R/library/Biostrings/help/consensusString+2CRNAStringSet-method.html
/usr/lib64/R/library/Biostrings/help/consensusString+2CXStringViews-method.html
/usr/lib64/R/library/Biostrings/help/consensusString+2Cmatrix-method.html
/usr/lib64/R/library/Biostrings/help/consensusString.html
/usr/lib64/R/library/Biostrings/help/consensusViews+2CAAMultipleAlignment-method.html
/usr/lib64/R/library/Biostrings/help/consensusViews+2CDNAMultipleAlignment-method.html
/usr/lib64/R/library/Biostrings/help/consensusViews+2CMultipleAlignment-method.html
/usr/lib64/R/library/Biostrings/help/consensusViews+2CRNAMultipleAlignment-method.html
/usr/lib64/R/library/Biostrings/help/consensusViews.html
/usr/lib64/R/library/Biostrings/help/countPDict+2CMaskedXString-method.html
/usr/lib64/R/library/Biostrings/help/countPDict+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/countPDict+2CXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/countPDict+2CXStringViews-method.html
/usr/lib64/R/library/Biostrings/help/countPDict.html
/usr/lib64/R/library/Biostrings/help/countPWM+2CDNAString-method.html
/usr/lib64/R/library/Biostrings/help/countPWM+2CMaskedDNAString-method.html
/usr/lib64/R/library/Biostrings/help/countPWM+2CXStringViews-method.html
/usr/lib64/R/library/Biostrings/help/countPWM+2Ccharacter-method.html
/usr/lib64/R/library/Biostrings/help/countPWM.html
/usr/lib64/R/library/Biostrings/help/countPattern+2CMaskedXString-method.html
/usr/lib64/R/library/Biostrings/help/countPattern+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/countPattern+2CXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/countPattern+2CXStringViews-method.html
/usr/lib64/R/library/Biostrings/help/countPattern+2Ccharacter-method.html
/usr/lib64/R/library/Biostrings/help/countPattern.html
/usr/lib64/R/library/Biostrings/help/coverage+2CAlignedXStringSet0-method.html
/usr/lib64/R/library/Biostrings/help/coverage+2CMIndex-method.html
/usr/lib64/R/library/Biostrings/help/coverage+2CMaskedXString-method.html
/usr/lib64/R/library/Biostrings/help/coverage+2CPairwiseAlignmentsSingleSubject-method.html
/usr/lib64/R/library/Biostrings/help/coverage+2CPairwiseAlignmentsSingleSubjectSummary-method.html
/usr/lib64/R/library/Biostrings/help/deletion+2CInDel-method.html
/usr/lib64/R/library/Biostrings/help/deletion+2CPairwiseAlignments-method.html
/usr/lib64/R/library/Biostrings/help/deletion.html
/usr/lib64/R/library/Biostrings/help/detail+2CMultipleAlignment-method.html
/usr/lib64/R/library/Biostrings/help/detail.html
/usr/lib64/R/library/Biostrings/help/dim+2CMultipleAlignment-method.html
/usr/lib64/R/library/Biostrings/help/dinucleotideFrequency.html
/usr/lib64/R/library/Biostrings/help/dinucleotideFrequencyTest+2CDNAStringSet-method.html
/usr/lib64/R/library/Biostrings/help/dinucleotideFrequencyTest+2CRNAStringSet-method.html
/usr/lib64/R/library/Biostrings/help/dinucleotideFrequencyTest.html
/usr/lib64/R/library/Biostrings/help/duplicated+2CPDict-method.html
/usr/lib64/R/library/Biostrings/help/duplicated+2CPreprocessedTB-method.html
/usr/lib64/R/library/Biostrings/help/elementNROWS+2CMIndex-method.html
/usr/lib64/R/library/Biostrings/help/encoding+2CXStringQuality-method.html
/usr/lib64/R/library/Biostrings/help/encoding.html
/usr/lib64/R/library/Biostrings/help/end+2CAlignedXStringSet0-method.html
/usr/lib64/R/library/Biostrings/help/endIndex+2CByPos_MIndex-method.html
/usr/lib64/R/library/Biostrings/help/endIndex.html
/usr/lib64/R/library/Biostrings/help/errorSubstitutionMatrices.html
/usr/lib64/R/library/Biostrings/help/extractAllMatches.html
/usr/lib64/R/library/Biostrings/help/extractAt+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/extractAt+2CXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/extractAt.html
/usr/lib64/R/library/Biostrings/help/extract_character_from_XString_by_positions+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/extract_character_from_XString_by_positions.html
/usr/lib64/R/library/Biostrings/help/extract_character_from_XString_by_ranges+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/extract_character_from_XString_by_ranges.html
/usr/lib64/R/library/Biostrings/help/fasta.index.html
/usr/lib64/R/library/Biostrings/help/fasta.seqlengths.html
/usr/lib64/R/library/Biostrings/help/fastq.geometry.html
/usr/lib64/R/library/Biostrings/help/fastq.seqlengths.html
/usr/lib64/R/library/Biostrings/help/findPalindromes+2CDNAString-method.html
/usr/lib64/R/library/Biostrings/help/findPalindromes+2CMaskedXString-method.html
/usr/lib64/R/library/Biostrings/help/findPalindromes+2CRNAString-method.html
/usr/lib64/R/library/Biostrings/help/findPalindromes+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/findPalindromes+2CXStringViews-method.html
/usr/lib64/R/library/Biostrings/help/findPalindromes.html
/usr/lib64/R/library/Biostrings/help/gaps+2CMaskedXString-method.html
/usr/lib64/R/library/Biostrings/help/getGeneticCode.html
/usr/lib64/R/library/Biostrings/help/getSeq.html
/usr/lib64/R/library/Biostrings/help/get_seqtype_conversion_lookup.html
/usr/lib64/R/library/Biostrings/help/gregexpr2.html
/usr/lib64/R/library/Biostrings/help/hasAllFlinks+2CACtree2-method.html
/usr/lib64/R/library/Biostrings/help/hasAllFlinks.html
/usr/lib64/R/library/Biostrings/help/hasLetterAt.html
/usr/lib64/R/library/Biostrings/help/hasOnlyBaseLetters+2CDNAString-method.html
/usr/lib64/R/library/Biostrings/help/hasOnlyBaseLetters+2CDNAStringSet-method.html
/usr/lib64/R/library/Biostrings/help/hasOnlyBaseLetters+2CMaskedXString-method.html
/usr/lib64/R/library/Biostrings/help/hasOnlyBaseLetters+2CRNAString-method.html
/usr/lib64/R/library/Biostrings/help/hasOnlyBaseLetters+2CRNAStringSet-method.html
/usr/lib64/R/library/Biostrings/help/hasOnlyBaseLetters+2CXStringViews-method.html
/usr/lib64/R/library/Biostrings/help/hasOnlyBaseLetters.html
/usr/lib64/R/library/Biostrings/help/head+2CPDict3Parts-method.html
/usr/lib64/R/library/Biostrings/help/head+2CTB_PDict-method.html
/usr/lib64/R/library/Biostrings/help/indel+2CAlignedXStringSet0-method.html
/usr/lib64/R/library/Biostrings/help/indel+2CPairwiseAlignments-method.html
/usr/lib64/R/library/Biostrings/help/indel.html
/usr/lib64/R/library/Biostrings/help/initialize+2CACtree2-method.html
/usr/lib64/R/library/Biostrings/help/initialize+2CPreprocessedTB-method.html
/usr/lib64/R/library/Biostrings/help/initialize+2CTwobit-method.html
/usr/lib64/R/library/Biostrings/help/initialize+2CXStringCodec-method.html
/usr/lib64/R/library/Biostrings/help/injectHardMask+2CMaskedXString-method.html
/usr/lib64/R/library/Biostrings/help/injectHardMask+2CXStringViews-method.html
/usr/lib64/R/library/Biostrings/help/injectHardMask.html
/usr/lib64/R/library/Biostrings/help/insertion+2CInDel-method.html
/usr/lib64/R/library/Biostrings/help/insertion+2CPairwiseAlignments-method.html
/usr/lib64/R/library/Biostrings/help/insertion.html
/usr/lib64/R/library/Biostrings/help/is.na+2CXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/isMatchingAt.html
/usr/lib64/R/library/Biostrings/help/isMatchingEndingAt+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/isMatchingEndingAt+2CXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/isMatchingEndingAt+2Ccharacter-method.html
/usr/lib64/R/library/Biostrings/help/isMatchingEndingAt.html
/usr/lib64/R/library/Biostrings/help/isMatchingStartingAt+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/isMatchingStartingAt+2CXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/isMatchingStartingAt+2Ccharacter-method.html
/usr/lib64/R/library/Biostrings/help/isMatchingStartingAt.html
/usr/lib64/R/library/Biostrings/help/lcprefix+2CXString+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/lcprefix+2CXString+2Ccharacter-method.html
/usr/lib64/R/library/Biostrings/help/lcprefix+2Ccharacter+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/lcprefix+2Ccharacter+2Ccharacter-method.html
/usr/lib64/R/library/Biostrings/help/lcprefix.html
/usr/lib64/R/library/Biostrings/help/lcsubstr+2CXString+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/lcsubstr+2CXString+2Ccharacter-method.html
/usr/lib64/R/library/Biostrings/help/lcsubstr+2Ccharacter+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/lcsubstr+2Ccharacter+2Ccharacter-method.html
/usr/lib64/R/library/Biostrings/help/lcsubstr.html
/usr/lib64/R/library/Biostrings/help/lcsuffix+2CXString+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/lcsuffix+2CXString+2Ccharacter-method.html
/usr/lib64/R/library/Biostrings/help/lcsuffix+2Ccharacter+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/lcsuffix+2Ccharacter+2Ccharacter-method.html
/usr/lib64/R/library/Biostrings/help/lcsuffix.html
/usr/lib64/R/library/Biostrings/help/length+2CMIndex-method.html
/usr/lib64/R/library/Biostrings/help/length+2CMaskedXString-method.html
/usr/lib64/R/library/Biostrings/help/length+2CPDict-method.html
/usr/lib64/R/library/Biostrings/help/length+2CPDict3Parts-method.html
/usr/lib64/R/library/Biostrings/help/length+2CPairwiseAlignmentsSingleSubjectSummary-method.html
/usr/lib64/R/library/Biostrings/help/length+2CPreprocessedTB-method.html
/usr/lib64/R/library/Biostrings/help/length+2CSparseList-method.html
/usr/lib64/R/library/Biostrings/help/letter+2CMaskedXString-method.html
/usr/lib64/R/library/Biostrings/help/letter+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/letter+2CXStringViews-method.html
/usr/lib64/R/library/Biostrings/help/letter+2Ccharacter-method.html
/usr/lib64/R/library/Biostrings/help/letter.html
/usr/lib64/R/library/Biostrings/help/letterFrequency+2CMaskedXString-method.html
/usr/lib64/R/library/Biostrings/help/letterFrequency+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/letterFrequency+2CXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/letterFrequency+2CXStringViews-method.html
/usr/lib64/R/library/Biostrings/help/letterFrequency.html
/usr/lib64/R/library/Biostrings/help/letterFrequencyInSlidingView+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/letterFrequencyInSlidingView.html
/usr/lib64/R/library/Biostrings/help/longestConsecutive.html
/usr/lib64/R/library/Biostrings/help/lowlevel-matching.html
/usr/lib64/R/library/Biostrings/help/make_XStringSet_from_strings+2CXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/make_XStringSet_from_strings.html
/usr/lib64/R/library/Biostrings/help/make_XString_from_string+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/make_XString_from_string.html
/usr/lib64/R/library/Biostrings/help/mask.html
/usr/lib64/R/library/Biostrings/help/maskGaps+2CMultipleAlignment-method.html
/usr/lib64/R/library/Biostrings/help/maskGaps.html
/usr/lib64/R/library/Biostrings/help/maskMotif+2CMaskedXString+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/maskMotif+2CMaskedXString+2Ccharacter-method.html
/usr/lib64/R/library/Biostrings/help/maskMotif+2CMultipleAlignment+2CANY-method.html
/usr/lib64/R/library/Biostrings/help/maskMotif+2CXString+2CANY-method.html
/usr/lib64/R/library/Biostrings/help/maskMotif.html
/usr/lib64/R/library/Biostrings/help/maskeddim+2CMultipleAlignment-method.html
/usr/lib64/R/library/Biostrings/help/maskeddim.html
/usr/lib64/R/library/Biostrings/help/maskedncol+2CMultipleAlignment-method.html
/usr/lib64/R/library/Biostrings/help/maskedncol.html
/usr/lib64/R/library/Biostrings/help/maskednrow+2CMultipleAlignment-method.html
/usr/lib64/R/library/Biostrings/help/maskednrow.html
/usr/lib64/R/library/Biostrings/help/maskedratio+2CMaskedXString-method.html
/usr/lib64/R/library/Biostrings/help/maskedratio+2CMultipleAlignment-method.html
/usr/lib64/R/library/Biostrings/help/maskedwidth+2CMaskedXString-method.html
/usr/lib64/R/library/Biostrings/help/masks+2CMaskedXString-method.html
/usr/lib64/R/library/Biostrings/help/masks+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/masks+3C-+2CMaskedXString+2CMaskCollection-method.html
/usr/lib64/R/library/Biostrings/help/masks+3C-+2CMaskedXString+2CNULL-method.html
/usr/lib64/R/library/Biostrings/help/masks+3C-+2CXString+2CANY-method.html
/usr/lib64/R/library/Biostrings/help/masks+3C-+2CXString+2CNULL-method.html
/usr/lib64/R/library/Biostrings/help/masks+3C-.html
/usr/lib64/R/library/Biostrings/help/masks.html
/usr/lib64/R/library/Biostrings/help/match+2CANY+2CXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/match+2CXStringSet+2CANY-method.html
/usr/lib64/R/library/Biostrings/help/match+2CXStringSet+2CXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/match-utils.html
/usr/lib64/R/library/Biostrings/help/matchLRPatterns+2CMaskedXString-method.html
/usr/lib64/R/library/Biostrings/help/matchLRPatterns+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/matchLRPatterns+2CXStringViews-method.html
/usr/lib64/R/library/Biostrings/help/matchLRPatterns.html
/usr/lib64/R/library/Biostrings/help/matchPDict+2CMaskedXString-method.html
/usr/lib64/R/library/Biostrings/help/matchPDict+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/matchPDict+2CXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/matchPDict+2CXStringViews-method.html
/usr/lib64/R/library/Biostrings/help/matchPDict-exact.html
/usr/lib64/R/library/Biostrings/help/matchPDict-inexact.html
/usr/lib64/R/library/Biostrings/help/matchPDict.html
/usr/lib64/R/library/Biostrings/help/matchPWM+2CDNAString-method.html
/usr/lib64/R/library/Biostrings/help/matchPWM+2CMaskedDNAString-method.html
/usr/lib64/R/library/Biostrings/help/matchPWM+2CXStringViews-method.html
/usr/lib64/R/library/Biostrings/help/matchPWM+2Ccharacter-method.html
/usr/lib64/R/library/Biostrings/help/matchPWM.html
/usr/lib64/R/library/Biostrings/help/matchPattern+2CMaskedXString-method.html
/usr/lib64/R/library/Biostrings/help/matchPattern+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/matchPattern+2CXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/matchPattern+2CXStringViews-method.html
/usr/lib64/R/library/Biostrings/help/matchPattern+2Ccharacter-method.html
/usr/lib64/R/library/Biostrings/help/matchPattern.html
/usr/lib64/R/library/Biostrings/help/matchProbePair+2CDNAString-method.html
/usr/lib64/R/library/Biostrings/help/matchProbePair+2CMaskedDNAString-method.html
/usr/lib64/R/library/Biostrings/help/matchProbePair+2CXStringViews-method.html
/usr/lib64/R/library/Biostrings/help/matchProbePair.html
/usr/lib64/R/library/Biostrings/help/matchprobes.html
/usr/lib64/R/library/Biostrings/help/maxScore+2CANY-method.html
/usr/lib64/R/library/Biostrings/help/maxScore.html
/usr/lib64/R/library/Biostrings/help/maxWeights+2Cmatrix-method.html
/usr/lib64/R/library/Biostrings/help/maxWeights.html
/usr/lib64/R/library/Biostrings/help/mergeIUPACLetters.html
/usr/lib64/R/library/Biostrings/help/minScore+2CANY-method.html
/usr/lib64/R/library/Biostrings/help/minScore.html
/usr/lib64/R/library/Biostrings/help/minWeights+2Cmatrix-method.html
/usr/lib64/R/library/Biostrings/help/minWeights.html
/usr/lib64/R/library/Biostrings/help/misc.html
/usr/lib64/R/library/Biostrings/help/mismatch+2CANY+2CXStringViews-method.html
/usr/lib64/R/library/Biostrings/help/mismatch+2CAlignedXStringSet0+2Cmissing-method.html
/usr/lib64/R/library/Biostrings/help/mismatch.html
/usr/lib64/R/library/Biostrings/help/mismatchSummary+2CAlignedXStringSet0-method.html
/usr/lib64/R/library/Biostrings/help/mismatchSummary+2CPairwiseAlignmentsSingleSubject-method.html
/usr/lib64/R/library/Biostrings/help/mismatchSummary+2CPairwiseAlignmentsSingleSubjectSummary-method.html
/usr/lib64/R/library/Biostrings/help/mismatchSummary+2CQualityAlignedXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/mismatchSummary.html
/usr/lib64/R/library/Biostrings/help/mismatchTable+2CAlignedXStringSet0-method.html
/usr/lib64/R/library/Biostrings/help/mismatchTable+2CPairwiseAlignments-method.html
/usr/lib64/R/library/Biostrings/help/mismatchTable+2CQualityAlignedXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/mismatchTable.html
/usr/lib64/R/library/Biostrings/help/mkAllStrings.html
/usr/lib64/R/library/Biostrings/help/names+2CMIndex-method.html
/usr/lib64/R/library/Biostrings/help/names+2CPDict-method.html
/usr/lib64/R/library/Biostrings/help/names+3C-+2CMIndex-method.html
/usr/lib64/R/library/Biostrings/help/names+3C-+2CPDict-method.html
/usr/lib64/R/library/Biostrings/help/narrow+2CQualityScaledXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/narrow+2Ccharacter-method.html
/usr/lib64/R/library/Biostrings/help/nchar+2CAlignedXStringSet0-method.html
/usr/lib64/R/library/Biostrings/help/nchar+2CMaskedXString-method.html
/usr/lib64/R/library/Biostrings/help/nchar+2CMultipleAlignment-method.html
/usr/lib64/R/library/Biostrings/help/nchar+2CPairwiseAlignments-method.html
/usr/lib64/R/library/Biostrings/help/nchar+2CPairwiseAlignmentsSingleSubjectSummary-method.html
/usr/lib64/R/library/Biostrings/help/nchar+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/nchar+2CXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/nchar+2CXStringSetList-method.html
/usr/lib64/R/library/Biostrings/help/nchar+2CXStringViews-method.html
/usr/lib64/R/library/Biostrings/help/ncol+2CMultipleAlignment-method.html
/usr/lib64/R/library/Biostrings/help/nedit+2CPairwiseAlignments-method.html
/usr/lib64/R/library/Biostrings/help/nedit+2CPairwiseAlignmentsSingleSubjectSummary-method.html
/usr/lib64/R/library/Biostrings/help/nedit.html
/usr/lib64/R/library/Biostrings/help/neditAt.html
/usr/lib64/R/library/Biostrings/help/neditEndingAt+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/neditEndingAt+2CXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/neditEndingAt+2Ccharacter-method.html
/usr/lib64/R/library/Biostrings/help/neditEndingAt.html
/usr/lib64/R/library/Biostrings/help/neditStartingAt+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/neditStartingAt+2CXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/neditStartingAt+2Ccharacter-method.html
/usr/lib64/R/library/Biostrings/help/neditStartingAt.html
/usr/lib64/R/library/Biostrings/help/needwunsQS+2CXString+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/needwunsQS+2CXString+2Ccharacter-method.html
/usr/lib64/R/library/Biostrings/help/needwunsQS+2Ccharacter+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/needwunsQS+2Ccharacter+2Ccharacter-method.html
/usr/lib64/R/library/Biostrings/help/needwunsQS.html
/usr/lib64/R/library/Biostrings/help/nindel+2CAlignedXStringSet0-method.html
/usr/lib64/R/library/Biostrings/help/nindel+2CPairwiseAlignments-method.html
/usr/lib64/R/library/Biostrings/help/nindel+2CPairwiseAlignmentsSingleSubjectSummary-method.html
/usr/lib64/R/library/Biostrings/help/nindel.html
/usr/lib64/R/library/Biostrings/help/nmatch+2CANY+2CXStringViews-method.html
/usr/lib64/R/library/Biostrings/help/nmatch+2CPairwiseAlignments+2Cmissing-method.html
/usr/lib64/R/library/Biostrings/help/nmatch+2CPairwiseAlignmentsSingleSubjectSummary+2Cmissing-method.html
/usr/lib64/R/library/Biostrings/help/nmatch.html
/usr/lib64/R/library/Biostrings/help/nmismatch+2CANY+2CXStringViews-method.html
/usr/lib64/R/library/Biostrings/help/nmismatch+2CAlignedXStringSet0+2Cmissing-method.html
/usr/lib64/R/library/Biostrings/help/nmismatch+2CPairwiseAlignments+2Cmissing-method.html
/usr/lib64/R/library/Biostrings/help/nmismatch+2CPairwiseAlignmentsSingleSubjectSummary+2Cmissing-method.html
/usr/lib64/R/library/Biostrings/help/nmismatch.html
/usr/lib64/R/library/Biostrings/help/nnodes+2CACtree2-method.html
/usr/lib64/R/library/Biostrings/help/nnodes.html
/usr/lib64/R/library/Biostrings/help/nrow+2CMultipleAlignment-method.html
/usr/lib64/R/library/Biostrings/help/nucleotideFrequency.html
/usr/lib64/R/library/Biostrings/help/nucleotideFrequencyAt+2CXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/nucleotideFrequencyAt+2CXStringViews-method.html
/usr/lib64/R/library/Biostrings/help/nucleotideFrequencyAt.html
/usr/lib64/R/library/Biostrings/help/nucleotideSubstitutionMatrix.html
/usr/lib64/R/library/Biostrings/help/oligonucleotideFrequency+2CMaskedXString-method.html
/usr/lib64/R/library/Biostrings/help/oligonucleotideFrequency+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/oligonucleotideFrequency+2CXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/oligonucleotideFrequency+2CXStringViews-method.html
/usr/lib64/R/library/Biostrings/help/oligonucleotideFrequency.html
/usr/lib64/R/library/Biostrings/help/oligonucleotideTransitions.html
/usr/lib64/R/library/Biostrings/help/padAndClip.html
/usr/lib64/R/library/Biostrings/help/pairwiseAlignment+2CANY+2CANY-method.html
/usr/lib64/R/library/Biostrings/help/pairwiseAlignment+2CANY+2CQualityScaledXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/pairwiseAlignment+2CQualityScaledXStringSet+2CANY-method.html
/usr/lib64/R/library/Biostrings/help/pairwiseAlignment+2CQualityScaledXStringSet+2CQualityScaledXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/pairwiseAlignment.html
/usr/lib64/R/library/Biostrings/help/palindromeArmLength+2CDNAString-method.html
/usr/lib64/R/library/Biostrings/help/palindromeArmLength+2CRNAString-method.html
/usr/lib64/R/library/Biostrings/help/palindromeArmLength+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/palindromeArmLength+2CXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/palindromeArmLength+2CXStringViews-method.html
/usr/lib64/R/library/Biostrings/help/palindromeArmLength.html
/usr/lib64/R/library/Biostrings/help/palindromeLeftArm+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/palindromeLeftArm+2CXStringViews-method.html
/usr/lib64/R/library/Biostrings/help/palindromeLeftArm.html
/usr/lib64/R/library/Biostrings/help/palindromeRightArm+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/palindromeRightArm+2CXStringViews-method.html
/usr/lib64/R/library/Biostrings/help/palindromeRightArm.html
/usr/lib64/R/library/Biostrings/help/parallelVectorNames+2CAlignedXStringSet0-method.html
/usr/lib64/R/library/Biostrings/help/parallel_slot_names+2CAlignedXStringSet0-method.html
/usr/lib64/R/library/Biostrings/help/parallel_slot_names+2CPairwiseAlignments-method.html
/usr/lib64/R/library/Biostrings/help/parallel_slot_names+2CQualityScaledXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/paths.rds
/usr/lib64/R/library/Biostrings/help/pattern+2CPairwiseAlignments-method.html
/usr/lib64/R/library/Biostrings/help/pattern+2CXStringPartialMatches-method.html
/usr/lib64/R/library/Biostrings/help/pattern.html
/usr/lib64/R/library/Biostrings/help/patternFrequency+2CPDict-method.html
/usr/lib64/R/library/Biostrings/help/patternFrequency.html
/usr/lib64/R/library/Biostrings/help/pcompare+2CANY+2CXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/pcompare+2CXStringSet+2CANY-method.html
/usr/lib64/R/library/Biostrings/help/pcompare+2CXStringSet+2CXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/phiX174Phage.html
/usr/lib64/R/library/Biostrings/help/pid+2CPairwiseAlignments-method.html
/usr/lib64/R/library/Biostrings/help/pid.html
/usr/lib64/R/library/Biostrings/help/pmatchPattern+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/pmatchPattern+2CXStringViews-method.html
/usr/lib64/R/library/Biostrings/help/pmatchPattern+2Ccharacter-method.html
/usr/lib64/R/library/Biostrings/help/pmatchPattern.html
/usr/lib64/R/library/Biostrings/help/print.needwunsQS.html
/usr/lib64/R/library/Biostrings/help/quPhiX174.html
/usr/lib64/R/library/Biostrings/help/quality+2CQualityScaledXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/quality.html
/usr/lib64/R/library/Biostrings/help/qualitySubstitutionMatrices.html
/usr/lib64/R/library/Biostrings/help/ranges+2CAlignedXStringSet0-method.html
/usr/lib64/R/library/Biostrings/help/readAAMultipleAlignment.html
/usr/lib64/R/library/Biostrings/help/readAAStringSet.html
/usr/lib64/R/library/Biostrings/help/readBStringSet.html
/usr/lib64/R/library/Biostrings/help/readDNAMultipleAlignment.html
/usr/lib64/R/library/Biostrings/help/readDNAStringSet.html
/usr/lib64/R/library/Biostrings/help/readQualityScaledDNAStringSet.html
/usr/lib64/R/library/Biostrings/help/readRNAMultipleAlignment.html
/usr/lib64/R/library/Biostrings/help/readRNAStringSet.html
/usr/lib64/R/library/Biostrings/help/replaceAmbiguities.html
/usr/lib64/R/library/Biostrings/help/replaceAt+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/replaceAt+2CXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/replaceAt.html
/usr/lib64/R/library/Biostrings/help/replaceLetterAt+2CDNAString-method.html
/usr/lib64/R/library/Biostrings/help/replaceLetterAt+2CDNAStringSet-method.html
/usr/lib64/R/library/Biostrings/help/replaceLetterAt.html
/usr/lib64/R/library/Biostrings/help/reverse+2CMaskedXString-method.html
/usr/lib64/R/library/Biostrings/help/reverse+2CQualityScaledXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/reverseComplement+2CDNAString-method.html
/usr/lib64/R/library/Biostrings/help/reverseComplement+2CDNAStringSet-method.html
/usr/lib64/R/library/Biostrings/help/reverseComplement+2CMaskedDNAString-method.html
/usr/lib64/R/library/Biostrings/help/reverseComplement+2CMaskedRNAString-method.html
/usr/lib64/R/library/Biostrings/help/reverseComplement+2CQualityScaledDNAStringSet-method.html
/usr/lib64/R/library/Biostrings/help/reverseComplement+2CQualityScaledRNAStringSet-method.html
/usr/lib64/R/library/Biostrings/help/reverseComplement+2CRNAString-method.html
/usr/lib64/R/library/Biostrings/help/reverseComplement+2CRNAStringSet-method.html
/usr/lib64/R/library/Biostrings/help/reverseComplement+2CXStringViews-method.html
/usr/lib64/R/library/Biostrings/help/reverseComplement+2Cmatrix-method.html
/usr/lib64/R/library/Biostrings/help/reverseComplement.html
/usr/lib64/R/library/Biostrings/help/rowmask+2CMultipleAlignment-method.html
/usr/lib64/R/library/Biostrings/help/rowmask+3C-+2CMultipleAlignment+2CANY-method.html
/usr/lib64/R/library/Biostrings/help/rowmask+3C-+2CMultipleAlignment+2CNULL-method.html
/usr/lib64/R/library/Biostrings/help/rowmask+3C-.html
/usr/lib64/R/library/Biostrings/help/rowmask.html
/usr/lib64/R/library/Biostrings/help/rownames+2CMultipleAlignment-method.html
/usr/lib64/R/library/Biostrings/help/rownames+3C-+2CMultipleAlignment-method.html
/usr/lib64/R/library/Biostrings/help/saveXStringSet.html
/usr/lib64/R/library/Biostrings/help/score+2CPairwiseAlignments-method.html
/usr/lib64/R/library/Biostrings/help/score+2CPairwiseAlignmentsSingleSubjectSummary-method.html
/usr/lib64/R/library/Biostrings/help/seqinfo+2CDNAStringSet-method.html
/usr/lib64/R/library/Biostrings/help/seqinfo+3C-+2CDNAStringSet-method.html
/usr/lib64/R/library/Biostrings/help/seqinfo.html
/usr/lib64/R/library/Biostrings/help/seqtype+2CAAString-method.html
/usr/lib64/R/library/Biostrings/help/seqtype+2CAlignedXStringSet0-method.html
/usr/lib64/R/library/Biostrings/help/seqtype+2CBString-method.html
/usr/lib64/R/library/Biostrings/help/seqtype+2CDNAString-method.html
/usr/lib64/R/library/Biostrings/help/seqtype+2CMaskedXString-method.html
/usr/lib64/R/library/Biostrings/help/seqtype+2CMultipleAlignment-method.html
/usr/lib64/R/library/Biostrings/help/seqtype+2CPairwiseAlignments-method.html
/usr/lib64/R/library/Biostrings/help/seqtype+2CRNAString-method.html
/usr/lib64/R/library/Biostrings/help/seqtype+2CXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/seqtype+2CXStringSetList-method.html
/usr/lib64/R/library/Biostrings/help/seqtype+2CXStringViews-method.html
/usr/lib64/R/library/Biostrings/help/seqtype+3C-+2CMaskedXString-method.html
/usr/lib64/R/library/Biostrings/help/seqtype+3C-+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/seqtype+3C-+2CXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/seqtype+3C-+2CXStringSetList-method.html
/usr/lib64/R/library/Biostrings/help/seqtype+3C-+2CXStringViews-method.html
/usr/lib64/R/library/Biostrings/help/seqtype+3C-.html
/usr/lib64/R/library/Biostrings/help/seqtype.html
/usr/lib64/R/library/Biostrings/help/show+2CACtree2-method.html
/usr/lib64/R/library/Biostrings/help/show+2CAlignedXStringSet0-method.html
/usr/lib64/R/library/Biostrings/help/show+2CMIndex-method.html
/usr/lib64/R/library/Biostrings/help/show+2CMTB_PDict-method.html
/usr/lib64/R/library/Biostrings/help/show+2CMaskedXString-method.html
/usr/lib64/R/library/Biostrings/help/show+2CMultipleAlignment-method.html
/usr/lib64/R/library/Biostrings/help/show+2CPairwiseAlignments-method.html
/usr/lib64/R/library/Biostrings/help/show+2CPairwiseAlignmentsSingleSubjectSummary-method.html
/usr/lib64/R/library/Biostrings/help/show+2CQualityScaledXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/show+2CTB_PDict-method.html
/usr/lib64/R/library/Biostrings/help/show+2CTwobit-method.html
/usr/lib64/R/library/Biostrings/help/show+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/show+2CXStringPartialMatches-method.html
/usr/lib64/R/library/Biostrings/help/show+2CXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/show+2CXStringSetList-method.html
/usr/lib64/R/library/Biostrings/help/show+2CXStringViews-method.html
/usr/lib64/R/library/Biostrings/help/showAsCell+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/showAsCell+2CXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/srPhiX174.html
/usr/lib64/R/library/Biostrings/help/stackStrings.html
/usr/lib64/R/library/Biostrings/help/start+2CAlignedXStringSet0-method.html
/usr/lib64/R/library/Biostrings/help/startIndex+2CByPos_MIndex-method.html
/usr/lib64/R/library/Biostrings/help/startIndex.html
/usr/lib64/R/library/Biostrings/help/stringDist+2CQualityScaledXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/stringDist+2CXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/stringDist+2Ccharacter-method.html
/usr/lib64/R/library/Biostrings/help/stringDist.html
/usr/lib64/R/library/Biostrings/help/subject+2CPairwiseAlignments-method.html
/usr/lib64/R/library/Biostrings/help/subpatterns+2CXStringPartialMatches-method.html
/usr/lib64/R/library/Biostrings/help/subpatterns.html
/usr/lib64/R/library/Biostrings/help/subseq+2CMaskedXString-method.html
/usr/lib64/R/library/Biostrings/help/subseq+2Ccharacter-method.html
/usr/lib64/R/library/Biostrings/help/subseq+3C-+2CXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/subseq+3C-+2Ccharacter-method.html
/usr/lib64/R/library/Biostrings/help/substitution.matrices.html
/usr/lib64/R/library/Biostrings/help/substitution_matrices.html
/usr/lib64/R/library/Biostrings/help/substr+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/substring+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/summary+2CPairwiseAlignmentsSingleSubject-method.html
/usr/lib64/R/library/Biostrings/help/tail+2CPDict3Parts-method.html
/usr/lib64/R/library/Biostrings/help/tail+2CTB_PDict-method.html
/usr/lib64/R/library/Biostrings/help/tb+2CPDict3Parts-method.html
/usr/lib64/R/library/Biostrings/help/tb+2CPreprocessedTB-method.html
/usr/lib64/R/library/Biostrings/help/tb+2CTB_PDict-method.html
/usr/lib64/R/library/Biostrings/help/tb.html
/usr/lib64/R/library/Biostrings/help/tb.width+2CPDict3Parts-method.html
/usr/lib64/R/library/Biostrings/help/tb.width+2CPreprocessedTB-method.html
/usr/lib64/R/library/Biostrings/help/tb.width+2CTB_PDict-method.html
/usr/lib64/R/library/Biostrings/help/tb.width.html
/usr/lib64/R/library/Biostrings/help/threebands+2Ccharacter-method.html
/usr/lib64/R/library/Biostrings/help/toComplex+2CDNAString-method.html
/usr/lib64/R/library/Biostrings/help/toComplex.html
/usr/lib64/R/library/Biostrings/help/toString+2CAlignedXStringSet0-method.html
/usr/lib64/R/library/Biostrings/help/toString+2CMaskedXString-method.html
/usr/lib64/R/library/Biostrings/help/toString+2CPairwiseAlignmentsSingleSubject-method.html
/usr/lib64/R/library/Biostrings/help/toString+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/toString+2CXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/toString+2CXStringViews-method.html
/usr/lib64/R/library/Biostrings/help/translate+2CDNAString-method.html
/usr/lib64/R/library/Biostrings/help/translate+2CDNAStringSet-method.html
/usr/lib64/R/library/Biostrings/help/translate+2CMaskedDNAString-method.html
/usr/lib64/R/library/Biostrings/help/translate+2CMaskedRNAString-method.html
/usr/lib64/R/library/Biostrings/help/translate+2CRNAString-method.html
/usr/lib64/R/library/Biostrings/help/translate+2CRNAStringSet-method.html
/usr/lib64/R/library/Biostrings/help/translate.html
/usr/lib64/R/library/Biostrings/help/trimLRPatterns+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/trimLRPatterns+2CXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/trimLRPatterns+2Ccharacter-method.html
/usr/lib64/R/library/Biostrings/help/trimLRPatterns.html
/usr/lib64/R/library/Biostrings/help/trinucleotideFrequency.html
/usr/lib64/R/library/Biostrings/help/type+2CPairwiseAlignments-method.html
/usr/lib64/R/library/Biostrings/help/type+2CPairwiseAlignmentsSingleSubjectSummary-method.html
/usr/lib64/R/library/Biostrings/help/type.html
/usr/lib64/R/library/Biostrings/help/unaligned+2CAlignedXStringSet0-method.html
/usr/lib64/R/library/Biostrings/help/unaligned.html
/usr/lib64/R/library/Biostrings/help/uniqueLetters+2CMaskedXString-method.html
/usr/lib64/R/library/Biostrings/help/uniqueLetters+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/uniqueLetters+2CXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/uniqueLetters+2CXStringViews-method.html
/usr/lib64/R/library/Biostrings/help/uniqueLetters.html
/usr/lib64/R/library/Biostrings/help/unitScale.html
/usr/lib64/R/library/Biostrings/help/unlist+2CMIndex-method.html
/usr/lib64/R/library/Biostrings/help/unlist+2CXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/unmasked+2CMaskedXString-method.html
/usr/lib64/R/library/Biostrings/help/unmasked+2CMultipleAlignment-method.html
/usr/lib64/R/library/Biostrings/help/unmasked+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/unmasked.html
/usr/lib64/R/library/Biostrings/help/updateObject+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/updateObject+2CXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/vcountPDict+2CMaskedXString-method.html
/usr/lib64/R/library/Biostrings/help/vcountPDict+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/vcountPDict+2CXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/vcountPDict+2CXStringViews-method.html
/usr/lib64/R/library/Biostrings/help/vcountPDict.html
/usr/lib64/R/library/Biostrings/help/vcountPattern+2CMaskedXString-method.html
/usr/lib64/R/library/Biostrings/help/vcountPattern+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/vcountPattern+2CXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/vcountPattern+2CXStringViews-method.html
/usr/lib64/R/library/Biostrings/help/vcountPattern+2Ccharacter-method.html
/usr/lib64/R/library/Biostrings/help/vcountPattern.html
/usr/lib64/R/library/Biostrings/help/vmatchPDict+2CANY-method.html
/usr/lib64/R/library/Biostrings/help/vmatchPDict+2CMaskedXString-method.html
/usr/lib64/R/library/Biostrings/help/vmatchPDict+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/vmatchPDict.html
/usr/lib64/R/library/Biostrings/help/vmatchPattern+2CMaskedXString-method.html
/usr/lib64/R/library/Biostrings/help/vmatchPattern+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/vmatchPattern+2CXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/vmatchPattern+2CXStringViews-method.html
/usr/lib64/R/library/Biostrings/help/vmatchPattern+2Ccharacter-method.html
/usr/lib64/R/library/Biostrings/help/vmatchPattern.html
/usr/lib64/R/library/Biostrings/help/vwhichPDict+2CMaskedXString-method.html
/usr/lib64/R/library/Biostrings/help/vwhichPDict+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/vwhichPDict+2CXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/vwhichPDict+2CXStringViews-method.html
/usr/lib64/R/library/Biostrings/help/vwhichPDict.html
/usr/lib64/R/library/Biostrings/help/which.isMatchingAt.html
/usr/lib64/R/library/Biostrings/help/which.isMatchingEndingAt+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/which.isMatchingEndingAt+2CXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/which.isMatchingEndingAt+2Ccharacter-method.html
/usr/lib64/R/library/Biostrings/help/which.isMatchingEndingAt.html
/usr/lib64/R/library/Biostrings/help/which.isMatchingStartingAt+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/which.isMatchingStartingAt+2CXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/which.isMatchingStartingAt+2Ccharacter-method.html
/usr/lib64/R/library/Biostrings/help/which.isMatchingStartingAt.html
/usr/lib64/R/library/Biostrings/help/whichPDict+2CMaskedXString-method.html
/usr/lib64/R/library/Biostrings/help/whichPDict+2CXString-method.html
/usr/lib64/R/library/Biostrings/help/whichPDict+2CXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/whichPDict+2CXStringViews-method.html
/usr/lib64/R/library/Biostrings/help/whichPDict.html
/usr/lib64/R/library/Biostrings/help/width+2CAlignedXStringSet0-method.html
/usr/lib64/R/library/Biostrings/help/width+2CPDict-method.html
/usr/lib64/R/library/Biostrings/help/width+2CPDict3Parts-method.html
/usr/lib64/R/library/Biostrings/help/width+2CPreprocessedTB-method.html
/usr/lib64/R/library/Biostrings/help/width+2Ccharacter-method.html
/usr/lib64/R/library/Biostrings/help/width0+2CMIndex-method.html
/usr/lib64/R/library/Biostrings/help/width0.html
/usr/lib64/R/library/Biostrings/help/windows+2CQualityScaledXStringSet-method.html
/usr/lib64/R/library/Biostrings/help/windows+2Ccharacter-method.html
/usr/lib64/R/library/Biostrings/help/write.phylip.html
/usr/lib64/R/library/Biostrings/help/writePairwiseAlignments.html
/usr/lib64/R/library/Biostrings/help/writeQualityScaledXStringSet.html
/usr/lib64/R/library/Biostrings/help/writeXStringSet.html
/usr/lib64/R/library/Biostrings/help/wtPhiX174.html
/usr/lib64/R/library/Biostrings/help/xscat.html
/usr/lib64/R/library/Biostrings/help/xscodes+2CANY-method.html
/usr/lib64/R/library/Biostrings/help/xscodes.html
/usr/lib64/R/library/Biostrings/help/yeastSEQCHR1.html
/usr/lib64/R/library/Biostrings/html
/usr/lib64/R/library/Biostrings/html/00Index.html
/usr/lib64/R/library/Biostrings/html/AAString-class.html
/usr/lib64/R/library/Biostrings/html/AMINO_ACID_CODE.html
/usr/lib64/R/library/Biostrings/html/AlignedXStringSet-class.html
/usr/lib64/R/library/Biostrings/html/Biostrings-internals.html
/usr/lib64/R/library/Biostrings/html/DNAString-class.html
/usr/lib64/R/library/Biostrings/html/GENETIC_CODE.html
/usr/lib64/R/library/Biostrings/html/HNF4alpha.html
/usr/lib64/R/library/Biostrings/html/IUPAC_CODE_MAP.html
/usr/lib64/R/library/Biostrings/html/InDel-class.html
/usr/lib64/R/library/Biostrings/html/MIndex-class.html
/usr/lib64/R/library/Biostrings/html/MaskedXString-class.html
/usr/lib64/R/library/Biostrings/html/MultipleAlignment-class.html
/usr/lib64/R/library/Biostrings/html/PDict-class.html
/usr/lib64/R/library/Biostrings/html/PairwiseAlignments-class.html
/usr/lib64/R/library/Biostrings/html/PairwiseAlignments-io.html
/usr/lib64/R/library/Biostrings/html/QualityScaledXStringSet-class.html
/usr/lib64/R/library/Biostrings/html/R.css
/usr/lib64/R/library/Biostrings/html/RNAString-class.html
/usr/lib64/R/library/Biostrings/html/XString-class.html
/usr/lib64/R/library/Biostrings/html/XStringPartialMatches-class.html
/usr/lib64/R/library/Biostrings/html/XStringQuality-class.html
/usr/lib64/R/library/Biostrings/html/XStringSet-class.html
/usr/lib64/R/library/Biostrings/html/XStringSet-comparison.html
/usr/lib64/R/library/Biostrings/html/XStringSet-io.html
/usr/lib64/R/library/Biostrings/html/XStringSetList-class.html
/usr/lib64/R/library/Biostrings/html/XStringViews-class.html
/usr/lib64/R/library/Biostrings/html/align-utils.html
/usr/lib64/R/library/Biostrings/html/chartr.html
/usr/lib64/R/library/Biostrings/html/detail.html
/usr/lib64/R/library/Biostrings/html/dinucleotideFrequencyTest.html
/usr/lib64/R/library/Biostrings/html/findPalindromes.html
/usr/lib64/R/library/Biostrings/html/getSeq.html
/usr/lib64/R/library/Biostrings/html/gregexpr2.html
/usr/lib64/R/library/Biostrings/html/injectHardMask.html
/usr/lib64/R/library/Biostrings/html/letter.html
/usr/lib64/R/library/Biostrings/html/letterFrequency.html
/usr/lib64/R/library/Biostrings/html/longestConsecutive.html
/usr/lib64/R/library/Biostrings/html/lowlevel-matching.html
/usr/lib64/R/library/Biostrings/html/maskMotif.html
/usr/lib64/R/library/Biostrings/html/match-utils.html
/usr/lib64/R/library/Biostrings/html/matchLRPatterns.html
/usr/lib64/R/library/Biostrings/html/matchPDict-exact.html
/usr/lib64/R/library/Biostrings/html/matchPDict-inexact.html
/usr/lib64/R/library/Biostrings/html/matchPWM.html
/usr/lib64/R/library/Biostrings/html/matchPattern.html
/usr/lib64/R/library/Biostrings/html/matchProbePair.html
/usr/lib64/R/library/Biostrings/html/matchprobes.html
/usr/lib64/R/library/Biostrings/html/misc.html
/usr/lib64/R/library/Biostrings/html/needwunsQS.html
/usr/lib64/R/library/Biostrings/html/nucleotideFrequency.html
/usr/lib64/R/library/Biostrings/html/padAndClip.html
/usr/lib64/R/library/Biostrings/html/pairwiseAlignment.html
/usr/lib64/R/library/Biostrings/html/phiX174Phage.html
/usr/lib64/R/library/Biostrings/html/pid.html
/usr/lib64/R/library/Biostrings/html/pmatchPattern.html
/usr/lib64/R/library/Biostrings/html/replaceAt.html
/usr/lib64/R/library/Biostrings/html/replaceLetterAt.html
/usr/lib64/R/library/Biostrings/html/reverseComplement.html
/usr/lib64/R/library/Biostrings/html/seqinfo.html
/usr/lib64/R/library/Biostrings/html/stringDist.html
/usr/lib64/R/library/Biostrings/html/substitution_matrices.html
/usr/lib64/R/library/Biostrings/html/toComplex.html
/usr/lib64/R/library/Biostrings/html/translate.html
/usr/lib64/R/library/Biostrings/html/trimLRPatterns.html
/usr/lib64/R/library/Biostrings/html/xscat.html
/usr/lib64/R/library/Biostrings/html/yeastSEQCHR1.html
/usr/lib64/R/library/Biostrings/libs
/usr/lib64/R/library/Biostrings/libs/Biostrings.so
/usr/lib64/R/library/Biostrings/unitTests
/usr/lib64/R/library/Biostrings/unitTests/test_MultipleAlignment.R
/usr/lib64/R/library/Biostrings/unitTests/test_XString.R
/usr/lib64/R/library/Biostrings/unitTests/test_XStringSet.R
/usr/lib64/R/library/Biostrings/unitTests/test_XStringSetList.R
/usr/lib64/R/library/Biostrings/unitTests/test_findPalindromes.R
/usr/lib64/R/library/Biostrings/unitTests/test_matchDNAPattern.R.FIXME
/usr/lib64/R/library/Biostrings/unitTests/test_matchPDict.R
/usr/lib64/R/library/Biostrings/unitTests/test_pairwiseAlignment.R
/usr/lib64/R/library/Biostrings/unitTests/test_seqinfo.R
/usr/lib64/R/library/Biostrings/unitTests/test_twoWayAlphabetFrequency.R
References
Summary
In this tutorial we learn how to install R-Biostrings on Fedora 36 using yum and [dnf]((/fedora/36/dnf/).