How To Install R-biomaRt on Fedora 36
Introduction
In this tutorial we learn how to install R-biomaRt
on Fedora 36.
What is R-biomaRt
In recent years a wealth of biological data has become available in public data repositories. Easy access to these valuable data resources and firm integration with data analysis is needed for comprehensive bioinformatics data analysis. biomaRt provides an interface to a growing collection of databases implementing the BioMart software suite (http enables retrieval of large amounts of data in a uniform way without the need to know the underlying database schemas or write complex SQL queries. Examples of BioMart databases are Ensembl, COSMIC, Uniprot, HGNC, Gramene, Wormbase and dbSNP mapped to Ensembl. These major databases give biomaRt users direct access to a diverse set of data and enable a wide range of powerful online queries from gene annotation to database mining.
We can use yum
or dnf
to install R-biomaRt
on Fedora 36. In this tutorial we discuss both methods but you only need to choose one of method to install R-biomaRt.
Install R-biomaRt on Fedora 36 Using dnf
Update yum database with dnf
using the following command.
After updating yum database, We can install R-biomaRt
using dnf
by running the following command:
Install R-biomaRt on Fedora 36 Using yum
Update yum database with yum
using the following command.
After updating yum database, We can install R-biomaRt
using yum
by running the following command:
How To Uninstall R-biomaRt on Fedora 36
To uninstall only the R-biomaRt
package we can use the following command:
R-biomaRt Package Contents on Fedora 36
References
Summary
In this tutorial we learn how to install R-biomaRt
on Fedora 36 using yum and [dnf]((/fedora/36/dnf/).