How To Install python3-ruffus on Fedora 36

In this tutorial we learn how to install python3-ruffus in Fedora 36. python3-ruffus is Light-weight Python computational pipeline management

Introduction

In this tutorial we learn how to install python3-ruffus on Fedora 36.

What is python3-ruffus

The Ruffus module is a lightweight way to add support for running computational pipelines. Computational pipelines are often conceptually quite simple, especially if we breakdown the process into simple stages, or separate tasks. Each stage or task in a computational pipeline is represented by a Python function. Each Python function can be called in parallel to run multiple jobs.

We can use yum or dnf to install python3-ruffus on Fedora 36. In this tutorial we discuss both methods but you only need to choose one of method to install python3-ruffus.

Install python3-ruffus on Fedora 36 Using dnf

Update yum database with dnf using the following command.

sudo dnf makecache --refresh

After updating yum database, We can install python3-ruffus using dnf by running the following command:

sudo dnf -y install python3-ruffus

Install python3-ruffus on Fedora 36 Using yum

Update yum database with yum using the following command.

sudo yum makecache --refresh

After updating yum database, We can install python3-ruffus using yum by running the following command:

sudo yum -y install python3-ruffus

How To Uninstall python3-ruffus on Fedora 36

To uninstall only the python3-ruffus package we can use the following command:

sudo dnf remove python3-ruffus

python3-ruffus Package Contents on Fedora 36

/usr/lib/python3.10/site-packages/ruffus
/usr/lib/python3.10/site-packages/ruffus-2.8.4-py3.10.egg-info
/usr/lib/python3.10/site-packages/ruffus-2.8.4-py3.10.egg-info/PKG-INFO
/usr/lib/python3.10/site-packages/ruffus-2.8.4-py3.10.egg-info/SOURCES.txt
/usr/lib/python3.10/site-packages/ruffus-2.8.4-py3.10.egg-info/dependency_links.txt
/usr/lib/python3.10/site-packages/ruffus-2.8.4-py3.10.egg-info/top_level.txt
/usr/lib/python3.10/site-packages/ruffus/__init__.py
/usr/lib/python3.10/site-packages/ruffus/__pycache__
/usr/lib/python3.10/site-packages/ruffus/__pycache__/__init__.cpython-310.opt-1.pyc
/usr/lib/python3.10/site-packages/ruffus/__pycache__/__init__.cpython-310.pyc
/usr/lib/python3.10/site-packages/ruffus/__pycache__/adjacent_pairs_iterate.cpython-310.opt-1.pyc
/usr/lib/python3.10/site-packages/ruffus/__pycache__/adjacent_pairs_iterate.cpython-310.pyc
/usr/lib/python3.10/site-packages/ruffus/__pycache__/cmdline.cpython-310.opt-1.pyc
/usr/lib/python3.10/site-packages/ruffus/__pycache__/cmdline.cpython-310.pyc
/usr/lib/python3.10/site-packages/ruffus/__pycache__/combinatorics.cpython-310.opt-1.pyc
/usr/lib/python3.10/site-packages/ruffus/__pycache__/combinatorics.cpython-310.pyc
/usr/lib/python3.10/site-packages/ruffus/__pycache__/dbdict.cpython-310.opt-1.pyc
/usr/lib/python3.10/site-packages/ruffus/__pycache__/dbdict.cpython-310.pyc
/usr/lib/python3.10/site-packages/ruffus/__pycache__/drmaa_wrapper.cpython-310.opt-1.pyc
/usr/lib/python3.10/site-packages/ruffus/__pycache__/drmaa_wrapper.cpython-310.pyc
/usr/lib/python3.10/site-packages/ruffus/__pycache__/file_name_parameters.cpython-310.opt-1.pyc
/usr/lib/python3.10/site-packages/ruffus/__pycache__/file_name_parameters.cpython-310.pyc
/usr/lib/python3.10/site-packages/ruffus/__pycache__/graph.cpython-310.opt-1.pyc
/usr/lib/python3.10/site-packages/ruffus/__pycache__/graph.cpython-310.pyc
/usr/lib/python3.10/site-packages/ruffus/__pycache__/parse_old_style_ruffus.cpython-310.opt-1.pyc
/usr/lib/python3.10/site-packages/ruffus/__pycache__/parse_old_style_ruffus.cpython-310.pyc
/usr/lib/python3.10/site-packages/ruffus/__pycache__/print_dependencies.cpython-310.opt-1.pyc
/usr/lib/python3.10/site-packages/ruffus/__pycache__/print_dependencies.cpython-310.pyc
/usr/lib/python3.10/site-packages/ruffus/__pycache__/proxy_logger.cpython-310.opt-1.pyc
/usr/lib/python3.10/site-packages/ruffus/__pycache__/proxy_logger.cpython-310.pyc
/usr/lib/python3.10/site-packages/ruffus/__pycache__/ruffus_exceptions.cpython-310.opt-1.pyc
/usr/lib/python3.10/site-packages/ruffus/__pycache__/ruffus_exceptions.cpython-310.pyc
/usr/lib/python3.10/site-packages/ruffus/__pycache__/ruffus_utility.cpython-310.opt-1.pyc
/usr/lib/python3.10/site-packages/ruffus/__pycache__/ruffus_utility.cpython-310.pyc
/usr/lib/python3.10/site-packages/ruffus/__pycache__/ruffus_version.cpython-310.opt-1.pyc
/usr/lib/python3.10/site-packages/ruffus/__pycache__/ruffus_version.cpython-310.pyc
/usr/lib/python3.10/site-packages/ruffus/__pycache__/task.cpython-310.opt-1.pyc
/usr/lib/python3.10/site-packages/ruffus/__pycache__/task.cpython-310.pyc
/usr/lib/python3.10/site-packages/ruffus/adjacent_pairs_iterate.py
/usr/lib/python3.10/site-packages/ruffus/cmdline.py
/usr/lib/python3.10/site-packages/ruffus/combinatorics.py
/usr/lib/python3.10/site-packages/ruffus/dbdict.py
/usr/lib/python3.10/site-packages/ruffus/drmaa_wrapper.py
/usr/lib/python3.10/site-packages/ruffus/file_name_parameters.py
/usr/lib/python3.10/site-packages/ruffus/graph.py
/usr/lib/python3.10/site-packages/ruffus/parse_old_style_ruffus.py
/usr/lib/python3.10/site-packages/ruffus/print_dependencies.py
/usr/lib/python3.10/site-packages/ruffus/proxy_logger.py
/usr/lib/python3.10/site-packages/ruffus/ruffus_exceptions.py
/usr/lib/python3.10/site-packages/ruffus/ruffus_utility.py
/usr/lib/python3.10/site-packages/ruffus/ruffus_version.py
/usr/lib/python3.10/site-packages/ruffus/task.py
/usr/lib/python3.10/site-packages/ruffus/test
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/check_subpipeline_cmdline.cpython-310.opt-1.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/check_subpipeline_cmdline.cpython-310.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/complicated_example.cpython-310.opt-1.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/complicated_example.cpython-310.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/create_test_script_from_dependency_tree.cpython-310.opt-1.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/create_test_script_from_dependency_tree.cpython-310.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/draw_specified_dependency_tree.cpython-310.opt-1.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/draw_specified_dependency_tree.cpython-310.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/five_second.cpython-310.opt-1.pyc
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/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/qrsh_workaround.cpython-310.opt-1.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/qrsh_workaround.cpython-310.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/simpler_with_shared_logging.cpython-310.opt-1.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/simpler_with_shared_logging.cpython-310.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/slow_process_for_testing.cpython-310.opt-1.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/slow_process_for_testing.cpython-310.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_N_x_M_and_collate.cpython-310.opt-1.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_N_x_M_and_collate.cpython-310.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_active_if.cpython-310.opt-1.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_active_if.cpython-310.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_branching_dependencies.cpython-310.opt-1.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_branching_dependencies.cpython-310.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_check_if_uptodate.cpython-310.opt-1.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_check_if_uptodate.cpython-310.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_cmdline.cpython-310.opt-1.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_cmdline.cpython-310.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_collate.cpython-310.opt-1.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_collate.cpython-310.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_combinatorics.cpython-310.opt-1.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_combinatorics.cpython-310.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_drmaa_wrapper_run_job_locally.cpython-310.opt-1.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_drmaa_wrapper_run_job_locally.cpython-310.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_empty_files_decorator.cpython-310.opt-1.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_empty_files_decorator.cpython-310.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_exceptions.cpython-310.opt-1.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_exceptions.cpython-310.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_file_name_parameters.cpython-310.opt-1.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_file_name_parameters.cpython-310.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_files_decorator.cpython-310.opt-1.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_files_decorator.cpython-310.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_filesre_combine.cpython-310.opt-1.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_filesre_combine.cpython-310.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_filesre_split_and_combine.cpython-310.opt-1.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_filesre_split_and_combine.cpython-310.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_follows_mkdir.cpython-310.opt-1.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_follows_mkdir.cpython-310.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_functions_with_extras.cpython-310.opt-1.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_functions_with_extras.cpython-310.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_graphviz.cpython-310.opt-1.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_graphviz.cpython-310.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_inputs_with_multiple_args_raising_exception.cpython-310.opt-1.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_inputs_with_multiple_args_raising_exception.cpython-310.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_job_completion_checksums.cpython-310.opt-1.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_job_completion_checksums.cpython-310.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_job_history_with_exceptions.cpython-310.opt-1.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_job_history_with_exceptions.cpython-310.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_mkdir.cpython-310.opt-1.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_mkdir.cpython-310.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_newstyle_combinatorics.cpython-310.opt-1.pyc
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/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_newstyle_proxy.cpython-310.opt-1.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_newstyle_proxy.cpython-310.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_newstyle_regex_error_messages.cpython-310.opt-1.pyc
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/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_pausing.cpython-310.opt-1.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_pausing.cpython-310.pyc
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/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_pool_manager.cpython-310.opt-1.pyc
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/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_posttask_merge.cpython-310.opt-1.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_posttask_merge.cpython-310.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_proxy_logger.cpython-310.opt-1.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_proxy_logger.cpython-310.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_regex_error_messages.cpython-310.opt-1.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_regex_error_messages.cpython-310.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_ruffus_utility.cpython-310.opt-1.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_ruffus_utility.cpython-310.pyc
/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_ruffus_utility_parse_task_arguments.cpython-310.opt-1.pyc
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/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_split_regex_and_collate.cpython-310.opt-1.pyc
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/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_split_subdivide_checkpointing.cpython-310.opt-1.pyc
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/usr/lib/python3.10/site-packages/ruffus/test/__pycache__/test_subpipeline.cpython-310.opt-1.pyc
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/usr/lib/python3.10/site-packages/ruffus/test/complicated_example.py
/usr/lib/python3.10/site-packages/ruffus/test/create_test_script_from_dependency_tree.py
/usr/lib/python3.10/site-packages/ruffus/test/draw_specified_dependency_tree.py
/usr/lib/python3.10/site-packages/ruffus/test/five_second.py
/usr/lib/python3.10/site-packages/ruffus/test/manual_test_ctrl_c_exceptions.py
/usr/lib/python3.10/site-packages/ruffus/test/manual_test_ctrl_c_exceptions_drmaa.py
/usr/lib/python3.10/site-packages/ruffus/test/manual_test_drmaa.py
/usr/lib/python3.10/site-packages/ruffus/test/play_with_colours.py
/usr/lib/python3.10/site-packages/ruffus/test/qrsh_workaround.py
/usr/lib/python3.10/site-packages/ruffus/test/run_all_unit_tests.cmd
/usr/lib/python3.10/site-packages/ruffus/test/run_all_unit_tests3.cmd
/usr/lib/python3.10/site-packages/ruffus/test/simpler_with_shared_logging.py
/usr/lib/python3.10/site-packages/ruffus/test/slow_process_for_testing.py
/usr/lib/python3.10/site-packages/ruffus/test/test_N_x_M_and_collate.py
/usr/lib/python3.10/site-packages/ruffus/test/test_active_if.py
/usr/lib/python3.10/site-packages/ruffus/test/test_branching_dependencies.py
/usr/lib/python3.10/site-packages/ruffus/test/test_check_if_uptodate.py
/usr/lib/python3.10/site-packages/ruffus/test/test_cmdline.py
/usr/lib/python3.10/site-packages/ruffus/test/test_collate.py
/usr/lib/python3.10/site-packages/ruffus/test/test_combinatorics.py
/usr/lib/python3.10/site-packages/ruffus/test/test_drmaa_wrapper_run_job_locally.py
/usr/lib/python3.10/site-packages/ruffus/test/test_empty_files_decorator.py
/usr/lib/python3.10/site-packages/ruffus/test/test_exceptions.py
/usr/lib/python3.10/site-packages/ruffus/test/test_file_name_parameters.py
/usr/lib/python3.10/site-packages/ruffus/test/test_files_decorator.py
/usr/lib/python3.10/site-packages/ruffus/test/test_filesre_combine.py
/usr/lib/python3.10/site-packages/ruffus/test/test_filesre_split_and_combine.py
/usr/lib/python3.10/site-packages/ruffus/test/test_follows_mkdir.py
/usr/lib/python3.10/site-packages/ruffus/test/test_functions_with_extras.py
/usr/lib/python3.10/site-packages/ruffus/test/test_graphviz.py
/usr/lib/python3.10/site-packages/ruffus/test/test_inputs_with_multiple_args_raising_exception.py
/usr/lib/python3.10/site-packages/ruffus/test/test_job_completion_checksums.py
/usr/lib/python3.10/site-packages/ruffus/test/test_job_history_with_exceptions.py
/usr/lib/python3.10/site-packages/ruffus/test/test_mkdir.py
/usr/lib/python3.10/site-packages/ruffus/test/test_newstyle_combinatorics.py
/usr/lib/python3.10/site-packages/ruffus/test/test_newstyle_proxy.py
/usr/lib/python3.10/site-packages/ruffus/test/test_newstyle_regex_error_messages.py
/usr/lib/python3.10/site-packages/ruffus/test/test_pausing.py
/usr/lib/python3.10/site-packages/ruffus/test/test_pipeline_printout_graph.py
/usr/lib/python3.10/site-packages/ruffus/test/test_pool_manager.py
/usr/lib/python3.10/site-packages/ruffus/test/test_posttask_merge.py
/usr/lib/python3.10/site-packages/ruffus/test/test_proxy_logger.py
/usr/lib/python3.10/site-packages/ruffus/test/test_regex_error_messages.py
/usr/lib/python3.10/site-packages/ruffus/test/test_ruffus_utility.py
/usr/lib/python3.10/site-packages/ruffus/test/test_ruffus_utility_parse_task_arguments.py
/usr/lib/python3.10/site-packages/ruffus/test/test_runtime_data.py
/usr/lib/python3.10/site-packages/ruffus/test/test_softlink_uptodate.py
/usr/lib/python3.10/site-packages/ruffus/test/test_split_and_combine.py
/usr/lib/python3.10/site-packages/ruffus/test/test_split_regex_and_collate.py
/usr/lib/python3.10/site-packages/ruffus/test/test_split_subdivide_checkpointing.py
/usr/lib/python3.10/site-packages/ruffus/test/test_subpipeline.py
/usr/lib/python3.10/site-packages/ruffus/test/test_suffix_output_dir.py
/usr/lib/python3.10/site-packages/ruffus/test/test_task_file_dependencies.py
/usr/lib/python3.10/site-packages/ruffus/test/test_task_misc.py
/usr/lib/python3.10/site-packages/ruffus/test/test_transform_add_inputs.py
/usr/lib/python3.10/site-packages/ruffus/test/test_transform_formatter.py
/usr/lib/python3.10/site-packages/ruffus/test/test_transform_inputs.py
/usr/lib/python3.10/site-packages/ruffus/test/test_transform_with_no_re_matches.py
/usr/lib/python3.10/site-packages/ruffus/test/test_tutorial7.py
/usr/lib/python3.10/site-packages/ruffus/test/test_unicode_filenames.py
/usr/lib/python3.10/site-packages/ruffus/test/test_verbosity.py
/usr/lib/python3.10/site-packages/ruffus/test/test_with_logger.py
/usr/share/doc/python3-ruffus
/usr/share/doc/python3-ruffus/README.rst
/usr/share/licenses/python3-ruffus
/usr/share/licenses/python3-ruffus/LICENSE.TXT

References

Summary

In this tutorial we learn how to install python3-ruffus on Fedora 36 using yum and [dnf]((/fedora/36/dnf/).