How To Install python3-espresso-mpich on Fedora 36
In this tutorial we learn how to install python3-espresso-mpich in Fedora 36. python3-espresso-mpich is Extensible Simulation Package for Research on Soft matter
Introduction
In this tutorial we learn how to install python3-espresso-mpich on Fedora 36.
What is python3-espresso-mpich
ESPResSo can perform Molecular Dynamics simulations of bead-spring models in various ensembles ((N,V,E), (N,V,T), and (N,p,T)). ESPResSo contains a number of advanced algorithms, e.g. * DPD thermostat (for hydrodynamics) * P3M, MMM2D, MMM1D, ELC for electrostatic interactions * Lattice-Boltzmann for hydrodynamics This package contains espresso compiled against MPICH2.
We can use yum or dnf to install python3-espresso-mpich on Fedora 36. In this tutorial we discuss both methods but you only need to choose one of method to install python3-espresso-mpich.
Install python3-espresso-mpich on Fedora 36 Using dnf
Update yum database with dnf using the following command.
sudo dnf makecache --refresh
After updating yum database, We can install python3-espresso-mpich using dnf by running the following command:
sudo dnf -y install python3-espresso-mpich
Install python3-espresso-mpich on Fedora 36 Using yum
Update yum database with yum using the following command.
sudo yum makecache --refresh
After updating yum database, We can install python3-espresso-mpich using yum by running the following command:
sudo yum -y install python3-espresso-mpich
How To Uninstall python3-espresso-mpich on Fedora 36
To uninstall only the python3-espresso-mpich package we can use the following command:
sudo dnf remove python3-espresso-mpich
python3-espresso-mpich Package Contents on Fedora 36
/usr/lib/.build-id
/usr/lib/.build-id/00
/usr/lib/.build-id/00/78c4b073b7354cc960c9902b7199c95e7e7fcd
/usr/lib/.build-id/03
/usr/lib/.build-id/03/d4047da2c06f622fc11b4dce435faf35d917af
/usr/lib/.build-id/12/9235fab3b3cd8c4379de63d35c55161b4dd928
/usr/lib/.build-id/15
/usr/lib/.build-id/15/853b1c80747b72909a943405e2fcd5de93a51b
/usr/lib/.build-id/19
/usr/lib/.build-id/19/5db996d88fbca444f22ea03a96cf05ef444e57
/usr/lib/.build-id/1c
/usr/lib/.build-id/1c/142252d5ab786ba7c5cf85e1aa580d68330066
/usr/lib/.build-id/1e
/usr/lib/.build-id/1e/4182b7cb93f2de49a27d055ed35a4f44eea003
/usr/lib/.build-id/2a/2340c7a19ecd84b07288306d64849d25b9f9a4
/usr/lib/.build-id/2b
/usr/lib/.build-id/2b/8247436ae8a6c994f8d5d369a7b7ddb86f0b97
/usr/lib/.build-id/3a
/usr/lib/.build-id/3a/c773deb05ce9de24d5803b77fefe3e3dc21a32
/usr/lib/.build-id/3d
/usr/lib/.build-id/3d/76605c037fdd85084570bdc25dfac211771623
/usr/lib/.build-id/44/94b1ea3561bf5fe2e7f200b64998dde0f0e3d0
/usr/lib/.build-id/44/d216596e85e401d84f227d7caa5548d5d58d3f
/usr/lib/.build-id/4b
/usr/lib/.build-id/4b/aed0a2a7bb6df7ff2202ac687dc0e69b9b44f6
/usr/lib/.build-id/51
/usr/lib/.build-id/51/d4f80ab9def8becf4778ac3694f4e80a119dc3
/usr/lib/.build-id/52
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/usr/lib/.build-id/53
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/usr/lib/.build-id/60/ff31bd83bf786beef167c7004b60f27c90bea6
/usr/lib/.build-id/61
/usr/lib/.build-id/61/107dacf9ff63bedd6314d908c3e08ae339e485
/usr/lib/.build-id/6a
/usr/lib/.build-id/6a/78fd9bb5a156d6f33ccd99bdc111208c2712c5
/usr/lib/.build-id/6c
/usr/lib/.build-id/6c/0e13a5a90ed2a215ba5280120029a7de11d706
/usr/lib/.build-id/7e
/usr/lib/.build-id/7e/8084055f5d6441a525a080f79b80d8a6eb7826
/usr/lib/.build-id/83
/usr/lib/.build-id/83/9183c8cef688b79a4284fa6f5b5472783648a3
/usr/lib/.build-id/84
/usr/lib/.build-id/84/d2193ffa5658f978a589f780678cb0b3bcb10d
/usr/lib/.build-id/96
/usr/lib/.build-id/96/91d4692118363e3647f1d9364707cfccdb9549
/usr/lib/.build-id/c5
/usr/lib/.build-id/c5/5a386dca4d5213e2ddc4fdad2142a06960a767
/usr/lib/.build-id/cb
/usr/lib/.build-id/cb/51051a63e54a1c5348b01f4462dbe0b7737a6e
/usr/lib/.build-id/cd
/usr/lib/.build-id/cd/fd2fe86519e38f4a8033a88f93f4adb95ca80b
/usr/lib/.build-id/d6
/usr/lib/.build-id/d6/6e73021ed6d13e9367a9f53271653c380a5b32
/usr/lib/.build-id/de
/usr/lib/.build-id/de/9d1b0c8677a8c5bbcbd459cb06e1eed1f8636d
/usr/lib/.build-id/df
/usr/lib/.build-id/df/d126835e6e1c9583de9433559e2004851af702
/usr/lib/.build-id/e5
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/usr/lib/.build-id/ef
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/usr/lib/.build-id/ef/25ba808760a84da5f11e1fe6fe2b164f216759
/usr/lib/.build-id/f0
/usr/lib/.build-id/f0/b22d0311ec5482aafd4a971b5791b95dc01f9e
/usr/lib/.build-id/f2/d8b0ed4a9933c5339b06b5e35908fcf9dcffb4
/usr/lib/.build-id/f3
/usr/lib/.build-id/f3/57e0b7216d4a86973119288a8a750f88d2b2bc
/usr/lib/.build-id/fb
/usr/lib/.build-id/fb/ecd05a33e5a97c3843aaa249ea418d1914aaf5
/usr/lib64/python3.10/site-packages/mpich/espressomd
/usr/lib64/python3.10/site-packages/mpich/espressomd/EspressoConfig.so
/usr/lib64/python3.10/site-packages/mpich/espressomd/EspressoCore.so
/usr/lib64/python3.10/site-packages/mpich/espressomd/EspressoScriptInterface.so
/usr/lib64/python3.10/site-packages/mpich/espressomd/H5mdCore.so
/usr/lib64/python3.10/site-packages/mpich/espressomd/MDA_ESP
/usr/lib64/python3.10/site-packages/mpich/espressomd/MDA_ESP/__init__.py
/usr/lib64/python3.10/site-packages/mpich/espressomd/MDA_ESP/__pycache__
/usr/lib64/python3.10/site-packages/mpich/espressomd/MDA_ESP/__pycache__/__init__.cpython-310.opt-1.pyc
/usr/lib64/python3.10/site-packages/mpich/espressomd/MDA_ESP/__pycache__/__init__.cpython-310.pyc
/usr/lib64/python3.10/site-packages/mpich/espressomd/Shapes.so
/usr/lib64/python3.10/site-packages/mpich/espressomd/__cinit__.py
/usr/lib64/python3.10/site-packages/mpich/espressomd/__init__.py
/usr/lib64/python3.10/site-packages/mpich/espressomd/__pycache__
/usr/lib64/python3.10/site-packages/mpich/espressomd/__pycache__/__cinit__.cpython-310.opt-1.pyc
/usr/lib64/python3.10/site-packages/mpich/espressomd/__pycache__/__cinit__.cpython-310.pyc
/usr/lib64/python3.10/site-packages/mpich/espressomd/__pycache__/__init__.cpython-310.opt-1.pyc
/usr/lib64/python3.10/site-packages/mpich/espressomd/__pycache__/__init__.cpython-310.pyc
/usr/lib64/python3.10/site-packages/mpich/espressomd/__pycache__/accumulators.cpython-310.opt-1.pyc
/usr/lib64/python3.10/site-packages/mpich/espressomd/__pycache__/accumulators.cpython-310.pyc
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/usr/lib64/python3.10/site-packages/mpich/espressomd/__pycache__/comfixed.cpython-310.opt-1.pyc
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/usr/lib64/python3.10/site-packages/mpich/espressomd/__pycache__/constraints.cpython-310.opt-1.pyc
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/usr/lib64/python3.10/site-packages/mpich/espressomd/__pycache__/drude_helpers.cpython-310.opt-1.pyc
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/usr/lib64/python3.10/site-packages/mpich/espressomd/__pycache__/ekboundaries.cpython-310.opt-1.pyc
/usr/lib64/python3.10/site-packages/mpich/espressomd/__pycache__/ekboundaries.cpython-310.pyc
/usr/lib64/python3.10/site-packages/mpich/espressomd/__pycache__/gen_code_info.cpython-310.opt-1.pyc
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/usr/lib64/python3.10/site-packages/mpich/espressomd/__pycache__/gen_pxiconfig.cpython-310.opt-1.pyc
/usr/lib64/python3.10/site-packages/mpich/espressomd/__pycache__/gen_pxiconfig.cpython-310.pyc
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/usr/lib64/python3.10/site-packages/mpich/espressomd/__pycache__/highlander.cpython-310.pyc
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/usr/lib64/python3.10/site-packages/mpich/espressomd/__pycache__/observables.cpython-310.opt-1.pyc
/usr/lib64/python3.10/site-packages/mpich/espressomd/__pycache__/observables.cpython-310.pyc
/usr/lib64/python3.10/site-packages/mpich/espressomd/__pycache__/pair_criteria.cpython-310.opt-1.pyc
/usr/lib64/python3.10/site-packages/mpich/espressomd/__pycache__/pair_criteria.cpython-310.pyc
/usr/lib64/python3.10/site-packages/mpich/espressomd/__pycache__/shapes.cpython-310.opt-1.pyc
/usr/lib64/python3.10/site-packages/mpich/espressomd/__pycache__/shapes.cpython-310.pyc
/usr/lib64/python3.10/site-packages/mpich/espressomd/__pycache__/virtual_sites.cpython-310.opt-1.pyc
/usr/lib64/python3.10/site-packages/mpich/espressomd/__pycache__/virtual_sites.cpython-310.pyc
/usr/lib64/python3.10/site-packages/mpich/espressomd/_init.so
/usr/lib64/python3.10/site-packages/mpich/espressomd/accumulators.py
/usr/lib64/python3.10/site-packages/mpich/espressomd/actors.so
/usr/lib64/python3.10/site-packages/mpich/espressomd/analyze.so
/usr/lib64/python3.10/site-packages/mpich/espressomd/cellsystem.so
/usr/lib64/python3.10/site-packages/mpich/espressomd/checkpointing.py
/usr/lib64/python3.10/site-packages/mpich/espressomd/cluster_analysis.py
/usr/lib64/python3.10/site-packages/mpich/espressomd/code_info.so
/usr/lib64/python3.10/site-packages/mpich/espressomd/collision_detection.so
/usr/lib64/python3.10/site-packages/mpich/espressomd/comfixed.py
/usr/lib64/python3.10/site-packages/mpich/espressomd/constraints.py
/usr/lib64/python3.10/site-packages/mpich/espressomd/core_cluster_analysis.so
/usr/lib64/python3.10/site-packages/mpich/espressomd/cuda_init.so
/usr/lib64/python3.10/site-packages/mpich/espressomd/diamond.so
/usr/lib64/python3.10/site-packages/mpich/espressomd/drude_helpers.py
/usr/lib64/python3.10/site-packages/mpich/espressomd/ekboundaries.py
/usr/lib64/python3.10/site-packages/mpich/espressomd/electrokinetics.so
/usr/lib64/python3.10/site-packages/mpich/espressomd/electrostatic_extensions.so
/usr/lib64/python3.10/site-packages/mpich/espressomd/electrostatics.so
/usr/lib64/python3.10/site-packages/mpich/espressomd/galilei.so
/usr/lib64/python3.10/site-packages/mpich/espressomd/gen_code_info.py
/usr/lib64/python3.10/site-packages/mpich/espressomd/gen_pxiconfig.py
/usr/lib64/python3.10/site-packages/mpich/espressomd/globals.so
/usr/lib64/python3.10/site-packages/mpich/espressomd/highlander.py
/usr/lib64/python3.10/site-packages/mpich/espressomd/integrate.so
/usr/lib64/python3.10/site-packages/mpich/espressomd/interactions.so
/usr/lib64/python3.10/site-packages/mpich/espressomd/io
/usr/lib64/python3.10/site-packages/mpich/espressomd/io/__init__.py
/usr/lib64/python3.10/site-packages/mpich/espressomd/io/__pycache__
/usr/lib64/python3.10/site-packages/mpich/espressomd/io/__pycache__/__init__.cpython-310.opt-1.pyc
/usr/lib64/python3.10/site-packages/mpich/espressomd/io/__pycache__/__init__.cpython-310.pyc
/usr/lib64/python3.10/site-packages/mpich/espressomd/io/__pycache__/mpiio.cpython-310.opt-1.pyc
/usr/lib64/python3.10/site-packages/mpich/espressomd/io/__pycache__/mpiio.cpython-310.pyc
/usr/lib64/python3.10/site-packages/mpich/espressomd/io/mpiio.py
/usr/lib64/python3.10/site-packages/mpich/espressomd/io/writer
/usr/lib64/python3.10/site-packages/mpich/espressomd/io/writer/__init__.py
/usr/lib64/python3.10/site-packages/mpich/espressomd/io/writer/__pycache__
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/usr/lib64/python3.10/site-packages/mpich/espressomd/io/writer/__pycache__/__init__.cpython-310.pyc
/usr/lib64/python3.10/site-packages/mpich/espressomd/io/writer/__pycache__/h5md.cpython-310.opt-1.pyc
/usr/lib64/python3.10/site-packages/mpich/espressomd/io/writer/__pycache__/h5md.cpython-310.pyc
/usr/lib64/python3.10/site-packages/mpich/espressomd/io/writer/__pycache__/vtf.cpython-310.opt-1.pyc
/usr/lib64/python3.10/site-packages/mpich/espressomd/io/writer/__pycache__/vtf.cpython-310.pyc
/usr/lib64/python3.10/site-packages/mpich/espressomd/io/writer/h5md.py
/usr/lib64/python3.10/site-packages/mpich/espressomd/io/writer/vtf.py
/usr/lib64/python3.10/site-packages/mpich/espressomd/lb.so
/usr/lib64/python3.10/site-packages/mpich/espressomd/lbboundaries.py
/usr/lib64/python3.10/site-packages/mpich/espressomd/magnetostatic_extensions.so
/usr/lib64/python3.10/site-packages/mpich/espressomd/magnetostatics.so
/usr/lib64/python3.10/site-packages/mpich/espressomd/minimize_energy.so
/usr/lib64/python3.10/site-packages/mpich/espressomd/mpiio.so
/usr/lib64/python3.10/site-packages/mpich/espressomd/observables.py
/usr/lib64/python3.10/site-packages/mpich/espressomd/pair_criteria.py
/usr/lib64/python3.10/site-packages/mpich/espressomd/particle_data.so
/usr/lib64/python3.10/site-packages/mpich/espressomd/pdbparser.so
/usr/lib64/python3.10/site-packages/mpich/espressomd/pdbreader.so
/usr/lib64/python3.10/site-packages/mpich/espressomd/polymer.so
/usr/lib64/python3.10/site-packages/mpich/espressomd/profiler.so
/usr/lib64/python3.10/site-packages/mpich/espressomd/reaction_ensemble.so
/usr/lib64/python3.10/site-packages/mpich/espressomd/scafacos.so
/usr/lib64/python3.10/site-packages/mpich/espressomd/script_interface.so
/usr/lib64/python3.10/site-packages/mpich/espressomd/shapes.py
/usr/lib64/python3.10/site-packages/mpich/espressomd/system.so
/usr/lib64/python3.10/site-packages/mpich/espressomd/thermostat.so
/usr/lib64/python3.10/site-packages/mpich/espressomd/utils.so
/usr/lib64/python3.10/site-packages/mpich/espressomd/version.so
/usr/lib64/python3.10/site-packages/mpich/espressomd/virtual_sites.py
/usr/lib64/python3.10/site-packages/mpich/espressomd/visualization.so
/usr/lib64/python3.10/site-packages/mpich/espressomd/visualization_mayavi.so
/usr/lib64/python3.10/site-packages/mpich/espressomd/visualization_opengl.so
References
Summary
In this tutorial we learn how to install python3-espresso-mpich on Fedora 36 using yum and [dnf]((/fedora/36/dnf/).
