How To Install calcium-calculator on Fedora 36

In this tutorial we learn how to install calcium-calculator in Fedora 36. calcium-calculator is The Calcium Calculator

Introduction

In this tutorial we learn how to install calcium-calculator on Fedora 36.

What is calcium-calculator

CalC (“Calcium Calculator”) is a free (GNU copyleft) modeling tool for simulating intracellular calcium diffusion and buffering. CalC solves continuous reaction-diffusion PDEs describing the entry of calcium into a volume through point-like channels, and its diffusion, buffering and binding to calcium receptors.

We can use yum or dnf to install calcium-calculator on Fedora 36. In this tutorial we discuss both methods but you only need to choose one of method to install calcium-calculator.

Install calcium-calculator on Fedora 36 Using dnf

Update yum database with dnf using the following command.

sudo dnf makecache --refresh

After updating yum database, We can install calcium-calculator using dnf by running the following command:

sudo dnf -y install calcium-calculator

Install calcium-calculator on Fedora 36 Using yum

Update yum database with yum using the following command.

sudo yum makecache --refresh

After updating yum database, We can install calcium-calculator using yum by running the following command:

sudo yum -y install calcium-calculator

How To Uninstall calcium-calculator on Fedora 36

To uninstall only the calcium-calculator package we can use the following command:

sudo dnf remove calcium-calculator

calcium-calculator Package Contents on Fedora 36

/usr/bin/calcium-calculator
/usr/lib/.build-id
/usr/lib/.build-id/9c
/usr/lib/.build-id/9c/90d5a3ae3dd950837aac24f4ff000073d69920
/usr/share/doc/calcium-calculator
/usr/share/doc/calcium-calculator/README.txt
/usr/share/doc/calcium-calculator/examples
/usr/share/doc/calcium-calculator/examples/Bound_Calcium_Model
/usr/share/doc/calcium-calculator/examples/Bound_Calcium_Model/Fig2.BCM.par
/usr/share/doc/calcium-calculator/examples/Bound_Calcium_Model/_3D_check300_pump_kappa.par
/usr/share/doc/calcium-calculator/examples/Bound_Calcium_Model/demo.BCM.par
/usr/share/doc/calcium-calculator/examples/Bound_Calcium_Model/ode.BCM.par
/usr/share/doc/calcium-calculator/examples/Bound_Calcium_Model/pde.BCM.par
/usr/share/doc/calcium-calculator/examples/Buffer_Saturation_Model
/usr/share/doc/calcium-calculator/examples/Buffer_Saturation_Model/FCT_Fig10.par
/usr/share/doc/calcium-calculator/examples/Buffer_Saturation_Model/FCT_Fig11.par
/usr/share/doc/calcium-calculator/examples/Buffer_Saturation_Model/FCT_Fig12.par
/usr/share/doc/calcium-calculator/examples/Buffer_Saturation_Model/FCT_Fig13.par
/usr/share/doc/calcium-calculator/examples/Buffer_Saturation_Model/FCT_Fig3.par
/usr/share/doc/calcium-calculator/examples/Buffer_Saturation_Model/FCT_Fig4.par
/usr/share/doc/calcium-calculator/examples/Buffer_Saturation_Model/FCT_Fig5.par
/usr/share/doc/calcium-calculator/examples/Buffer_Saturation_Model/FCT_Fig7.par
/usr/share/doc/calcium-calculator/examples/Buffer_Saturation_Model/FCT_Fig8B.par
/usr/share/doc/calcium-calculator/examples/Buffer_Saturation_Model/FCT_Fig9.par
/usr/share/doc/calcium-calculator/examples/Buffer_Saturation_Model/FCT_decay.par
/usr/share/doc/calcium-calculator/examples/Buffer_Saturation_Model/FCT_main.par
/usr/share/doc/calcium-calculator/examples/CaM.par
/usr/share/doc/calcium-calculator/examples/Two_Site_Model
/usr/share/doc/calcium-calculator/examples/Two_Site_Model/STF.decay.stage1.par
/usr/share/doc/calcium-calculator/examples/Two_Site_Model/STF.decay.stage2.par
/usr/share/doc/calcium-calculator/examples/Two_Site_Model/STF.growth.par
/usr/share/doc/calcium-calculator/examples/Two_Site_Model/XY.ode.par
/usr/share/doc/calcium-calculator/examples/Two_Site_Model/actual.pde.par
/usr/share/doc/calcium-calculator/examples/Two_Site_Model/modified.pde.par
/usr/share/doc/calcium-calculator/examples/Two_Site_Model/quoted.pde.par
/usr/share/doc/calcium-calculator/examples/Two_Site_Model/tortuosity.pde.par
/usr/share/doc/calcium-calculator/examples/YamadaZucker.par
/usr/share/doc/calcium-calculator/examples/calculator.par
/usr/share/doc/calcium-calculator/examples/demo.par
/usr/share/doc/calcium-calculator/examples/free.par
/usr/share/doc/calcium-calculator/examples/loop.par
/usr/share/doc/calcium-calculator/examples/markov.par
/usr/share/doc/calcium-calculator/examples/ode.par
/usr/share/doc/calcium-calculator/examples/readBinaryPlot.m
/usr/share/doc/calcium-calculator/examples/readBinaryPlotConical.m

References

Summary

In this tutorial we learn how to install calcium-calculator on Fedora 36 using yum and [dnf]((/fedora/36/dnf/).