How To Install elph on Fedora 34

elph is Tool to find motifs in a set of DNA or protein sequences

Introduction

In this tutorial we learn how to install elph on Fedora 34.

What is `elph`

ELPH is a general-purpose Gibbs sampler for finding motifs in a set of DNA or protein sequences. The program takes as input a set containing anywhere from a few dozen to thousands of sequences, and searches through them for the most common motif, assuming that each sequence contains one copy of the motif.

We can use yum or dnf to install elph on Fedora 34. In this tutorial we discuss both methods but you only need to choose one of method to install elph.

Install elph on Fedora 34 Using dnf

Update yum database with dnf using the following command.

sudo dnf makecache --refresh

The output should look something like this:

Fedora 34 - x86_64                               20 kB/s | 6.6 kB     00:00
Fedora 34 openh264 (From Cisco) - x86_64        1.4 kB/s | 989  B     00:00
Fedora Modular 34 - x86_64                       68 kB/s | 6.5 kB     00:00
Fedora 34 - x86_64 - Updates                    3.5 kB/s | 6.2 kB     00:01
Fedora Modular 34 - x86_64 - Updates             17 kB/s | 5.9 kB     00:00
Metadata cache created.

After updating yum database, We can install elph using dnf by running the following command:

sudo dnf -y install elph

Install elph on Fedora 34 Using yum

Update yum database with yum using the following command.

sudo yum makecache --refresh

The output should look something like this:

Fedora 34 - x86_64                               20 kB/s | 6.6 kB     00:00
Fedora 34 openh264 (From Cisco) - x86_64        1.4 kB/s | 989  B     00:00
Fedora Modular 34 - x86_64                       68 kB/s | 6.5 kB     00:00
Fedora 34 - x86_64 - Updates                    3.5 kB/s | 6.2 kB     00:01
Fedora Modular 34 - x86_64 - Updates             17 kB/s | 5.9 kB     00:00
Metadata cache created.

After updating yum database, We can install elph using yum by running the following command:

sudo yum -y install elph

How To Uninstall elph on Fedora 34

To uninstall only the elph package we can use the following command:

sudo dnf remove elph

elph Package Contents on Fedora 34

/usr/bin/elph
/usr/lib/.build-id
/usr/lib/.build-id/00
/usr/lib/.build-id/00/dc45d2921690d6fbb58ae195f8c6986c584b4a
/usr/share/doc/elph
/usr/share/doc/elph/COPYRIGHT
/usr/share/doc/elph/LICENSE
/usr/share/doc/elph/README
/usr/share/doc/elph/Readme.ELPH
/usr/share/doc/elph/VERSION

References

elph website

Summary

In this tutorial we learn how to install elph on Fedora 34 using yum and dnf.