How To Install R-qtl on CentOS 8
R-qtl is Tools for analyzing QTL experiments
Introduction
In this tutorial we learn how to install R-qtl on CentOS 8.
What is R-qtl
R-qtl is an extensible, interactive environment for mapping quantitative trait loci (QTLs) in experimental crosses. Our goal is to make complex QTL mapping methods widely accessible and allow users to focus on modeling rather than computing. A key component of computational methods for QTL mapping is the hidden Markov model (HMM) technology for dealing with missing genotype data. We have implemented the main HMM algorithms, with allowance for the presence of genotyping errors, for backcrosses, intercrosses, and phase-known four-way crosses. The current version of R-qtl includes facilities for estimating genetic maps, identifying genotyping errors, and performing single-QTL genome scans and two-QTL, two-dimensional genome scans, by interval mapping (with the EM algorithm), Haley-Knott regression, and multiple imputation. All of this may be done in the presence of covariates (such as sex, age or treatment). One may also fit higher-order QTL models by multiple imputation and Haley-Knott regression.
We can use yum or dnf to install R-qtl on CentOS 8. In this tutorial we discuss both methods but you only need to choose one of method to install R-qtl.
Install R-qtl on CentOS 8 Using dnf
Update yum database with dnf using the following command.
sudo dnf makecache --refresh
The output should look something like this:
CentOS Linux 8 - AppStream 43 kB/s | 4.3 kB 00:00
CentOS Linux 8 - BaseOS 65 kB/s | 3.9 kB 00:00
CentOS Linux 8 - ContinuousRelease 43 kB/s | 3.0 kB 00:00
CentOS Linux 8 - Extras 23 kB/s | 1.5 kB 00:00
CentOS Linux 8 - FastTrack 40 kB/s | 3.0 kB 00:00
CentOS Linux 8 - HighAvailability 36 kB/s | 3.9 kB 00:00
CentOS Linux 8 - Plus 24 kB/s | 1.5 kB 00:00
CentOS Linux 8 - PowerTools 50 kB/s | 4.3 kB 00:00
Extra Packages for Enterprise Linux Modular 8 - x86_64 13 kB/s | 9.2 kB 00:00
Extra Packages for Enterprise Linux 8 - x86_64 24 kB/s | 8.5 kB 00:00
Metadata cache created.
After updating yum database, We can install R-qtl using dnf by running the following command:
sudo dnf -y install R-qtl
Install R-qtl on CentOS 8 Using yum
Update yum database with yum using the following command.
sudo yum makecache --refresh
The output should look something like this:
CentOS Linux 8 - AppStream 43 kB/s | 4.3 kB 00:00
CentOS Linux 8 - BaseOS 65 kB/s | 3.9 kB 00:00
CentOS Linux 8 - ContinuousRelease 43 kB/s | 3.0 kB 00:00
CentOS Linux 8 - Extras 23 kB/s | 1.5 kB 00:00
CentOS Linux 8 - FastTrack 40 kB/s | 3.0 kB 00:00
CentOS Linux 8 - HighAvailability 36 kB/s | 3.9 kB 00:00
CentOS Linux 8 - Plus 24 kB/s | 1.5 kB 00:00
CentOS Linux 8 - PowerTools 50 kB/s | 4.3 kB 00:00
Extra Packages for Enterprise Linux Modular 8 - x86_64 13 kB/s | 9.2 kB 00:00
Extra Packages for Enterprise Linux 8 - x86_64 24 kB/s | 8.5 kB 00:00
Metadata cache created.
After updating yum database, We can install R-qtl using yum by running the following command:
sudo yum -y install R-qtl
How To Uninstall R-qtl on CentOS 8
To uninstall only the R-qtl package we can use the following command:
sudo dnf remove R-qtl
R-qtl Package Contents on CentOS 8
/usr/lib/.build-id
/usr/lib/.build-id/e0
/usr/lib/.build-id/e0/8d1b30312add7a29c5e341b382db8ff448e43c
/usr/lib64/R/library/qtl
/usr/lib64/R/library/qtl/BUGS.txt
/usr/lib64/R/library/qtl/CITATION
/usr/lib64/R/library/qtl/DESCRIPTION
/usr/lib64/R/library/qtl/INDEX
/usr/lib64/R/library/qtl/INSTALL_ME.txt
/usr/lib64/R/library/qtl/MQM-TODO.txt
/usr/lib64/R/library/qtl/Meta
/usr/lib64/R/library/qtl/Meta/Rd.rds
/usr/lib64/R/library/qtl/Meta/data.rds
/usr/lib64/R/library/qtl/Meta/features.rds
/usr/lib64/R/library/qtl/Meta/hsearch.rds
/usr/lib64/R/library/qtl/Meta/links.rds
/usr/lib64/R/library/qtl/Meta/nsInfo.rds
/usr/lib64/R/library/qtl/Meta/package.rds
/usr/lib64/R/library/qtl/Meta/vignette.rds
/usr/lib64/R/library/qtl/NAMESPACE
/usr/lib64/R/library/qtl/NEWS.md
/usr/lib64/R/library/qtl/R
/usr/lib64/R/library/qtl/R/qtl
/usr/lib64/R/library/qtl/R/qtl.rdb
/usr/lib64/R/library/qtl/R/qtl.rdx
/usr/lib64/R/library/qtl/data
/usr/lib64/R/library/qtl/data/badorder.RData
/usr/lib64/R/library/qtl/data/bristle3.RData
/usr/lib64/R/library/qtl/data/bristleX.RData
/usr/lib64/R/library/qtl/data/fake.4way.RData
/usr/lib64/R/library/qtl/data/fake.bc.RData
/usr/lib64/R/library/qtl/data/fake.f2.RData
/usr/lib64/R/library/qtl/data/hyper.RData
/usr/lib64/R/library/qtl/data/listeria.RData
/usr/lib64/R/library/qtl/data/locations.RData
/usr/lib64/R/library/qtl/data/map10.RData
/usr/lib64/R/library/qtl/data/mapthis.RData
/usr/lib64/R/library/qtl/data/multitrait.RData
/usr/lib64/R/library/qtl/doc
/usr/lib64/R/library/qtl/doc/Sources
/usr/lib64/R/library/qtl/doc/Sources/MQM
/usr/lib64/R/library/qtl/doc/Sources/MQM/MQM-tour.R
/usr/lib64/R/library/qtl/doc/Sources/MQM/MQM-tour.Rnw
/usr/lib64/R/library/qtl/doc/Sources/MQM/MQM-tour.tex
/usr/lib64/R/library/qtl/doc/Sources/MQM/SweaveIt.R
/usr/lib64/R/library/qtl/doc/Sources/MQM/SweaveIt.Rout
/usr/lib64/R/library/qtl/doc/Sources/MQM/mqm
/usr/lib64/R/library/qtl/doc/Sources/MQM/mqm/advantages_Rd.txt
/usr/lib64/R/library/qtl/doc/Sources/MQM/mqm/advantages_latex.txt
/usr/lib64/R/library/qtl/doc/Sources/MQM/mqm/description.txt
/usr/lib64/R/library/qtl/doc/Sources/MQM/mqm/limitations.txt
/usr/lib64/R/library/qtl/doc/Sources/MQM/mqm/parallelisation_references.txt
/usr/lib64/R/library/qtl/doc/Sources/MQM/mqm/significance_references.txt
/usr/lib64/R/library/qtl/doc/Sources/MQM/mqm/standard_example.txt
/usr/lib64/R/library/qtl/doc/Sources/MQM/mqm/standard_references.txt
/usr/lib64/R/library/qtl/doc/Sources/MQM/mqm/standard_seealso.txt
/usr/lib64/R/library/qtl/doc/Sources/MQM/sweaveit.bat
/usr/lib64/R/library/qtl/doc/Sources/MQM/sweaveit.sh
/usr/lib64/R/library/qtl/doc/Sources/geneticmaps.Rnw
/usr/lib64/R/library/qtl/doc/Sources/new_multiqtl.Rnw
/usr/lib64/R/library/qtl/doc/Sources/new_summary_scanone.Rnw
/usr/lib64/R/library/qtl/doc/Sources/new_summary_scantwo.Rnw
/usr/lib64/R/library/qtl/doc/Sources/rqtltour.tex
/usr/lib64/R/library/qtl/doc/Sources/rqtltour2.tex
/usr/lib64/R/library/qtl/doc/bcsft.R
/usr/lib64/R/library/qtl/doc/bcsft.Rnw
/usr/lib64/R/library/qtl/doc/bcsft.pdf
/usr/lib64/R/library/qtl/doc/geneticmaps.R
/usr/lib64/R/library/qtl/doc/geneticmaps.pdf
/usr/lib64/R/library/qtl/doc/index.html
/usr/lib64/R/library/qtl/doc/new_multiqtl.R
/usr/lib64/R/library/qtl/doc/new_multiqtl.pdf
/usr/lib64/R/library/qtl/doc/new_summary_scanone.R
/usr/lib64/R/library/qtl/doc/new_summary_scanone.pdf
/usr/lib64/R/library/qtl/doc/new_summary_scantwo.R
/usr/lib64/R/library/qtl/doc/new_summary_scantwo.pdf
/usr/lib64/R/library/qtl/doc/rqtltour.R
/usr/lib64/R/library/qtl/doc/rqtltour.pdf
/usr/lib64/R/library/qtl/doc/rqtltour2.R
/usr/lib64/R/library/qtl/doc/rqtltour2.pdf
/usr/lib64/R/library/qtl/help
/usr/lib64/R/library/qtl/help/AnIndex
/usr/lib64/R/library/qtl/help/aliases.rds
/usr/lib64/R/library/qtl/help/paths.rds
/usr/lib64/R/library/qtl/help/qtl.rdb
/usr/lib64/R/library/qtl/help/qtl.rdx
/usr/lib64/R/library/qtl/html
/usr/lib64/R/library/qtl/html/00Index.html
/usr/lib64/R/library/qtl/html/MQM.html
/usr/lib64/R/library/qtl/html/R.css
/usr/lib64/R/library/qtl/html/a.starting.point.html
/usr/lib64/R/library/qtl/html/add.cim.covar.html
/usr/lib64/R/library/qtl/html/add.threshold.html
/usr/lib64/R/library/qtl/html/addcovarint.html
/usr/lib64/R/library/qtl/html/addint.html
/usr/lib64/R/library/qtl/html/addloctocross.html
/usr/lib64/R/library/qtl/html/addmarker.html
/usr/lib64/R/library/qtl/html/addpair.html
/usr/lib64/R/library/qtl/html/addqtl.html
/usr/lib64/R/library/qtl/html/addtoqtl.html
/usr/lib64/R/library/qtl/html/allchrsplits.html
/usr/lib64/R/library/qtl/html/argmax.geno.html
/usr/lib64/R/library/qtl/html/arithscan.html
/usr/lib64/R/library/qtl/html/arithscanperm.html
/usr/lib64/R/library/qtl/html/badorder.html
/usr/lib64/R/library/qtl/html/bayesint.html
/usr/lib64/R/library/qtl/html/bristle3.html
/usr/lib64/R/library/qtl/html/bristleX.html
/usr/lib64/R/library/qtl/html/c.cross.html
/usr/lib64/R/library/qtl/html/c.scanone.html
/usr/lib64/R/library/qtl/html/c.scanoneperm.html
/usr/lib64/R/library/qtl/html/c.scantwo.html
/usr/lib64/R/library/qtl/html/c.scantwoperm.html
/usr/lib64/R/library/qtl/html/calc.errorlod.html
/usr/lib64/R/library/qtl/html/calc.genoprob.html
/usr/lib64/R/library/qtl/html/calc.penalties.html
/usr/lib64/R/library/qtl/html/cbind.scanoneperm.html
/usr/lib64/R/library/qtl/html/cbind.scantwoperm.html
/usr/lib64/R/library/qtl/html/checkAlleles.html
/usr/lib64/R/library/qtl/html/chrlen.html
/usr/lib64/R/library/qtl/html/chrnames.html
/usr/lib64/R/library/qtl/html/cim.html
/usr/lib64/R/library/qtl/html/clean.cross.html
/usr/lib64/R/library/qtl/html/clean.scantwo.html
/usr/lib64/R/library/qtl/html/cleanGeno.html
/usr/lib64/R/library/qtl/html/comparecrosses.html
/usr/lib64/R/library/qtl/html/comparegeno.html
/usr/lib64/R/library/qtl/html/compareorder.html
/usr/lib64/R/library/qtl/html/condense.scantwo.html
/usr/lib64/R/library/qtl/html/convert.map.html
/usr/lib64/R/library/qtl/html/convert.scanone.html
/usr/lib64/R/library/qtl/html/convert.scantwo.html
/usr/lib64/R/library/qtl/html/convert2riself.html
/usr/lib64/R/library/qtl/html/convert2risib.html
/usr/lib64/R/library/qtl/html/convert2sa.html
/usr/lib64/R/library/qtl/html/countXO.html
/usr/lib64/R/library/qtl/html/drop.dupmarkers.html
/usr/lib64/R/library/qtl/html/drop.markers.html
/usr/lib64/R/library/qtl/html/drop.nullmarkers.html
/usr/lib64/R/library/qtl/html/dropfromqtl.html
/usr/lib64/R/library/qtl/html/droponemarker.html
/usr/lib64/R/library/qtl/html/effectplot.html
/usr/lib64/R/library/qtl/html/effectscan.html
/usr/lib64/R/library/qtl/html/est.map.html
/usr/lib64/R/library/qtl/html/est.rf.html
/usr/lib64/R/library/qtl/html/fake.4way.html
/usr/lib64/R/library/qtl/html/fake.bc.html
/usr/lib64/R/library/qtl/html/fake.f2.html
/usr/lib64/R/library/qtl/html/fill.geno.html
/usr/lib64/R/library/qtl/html/find.flanking.html
/usr/lib64/R/library/qtl/html/find.marker.html
/usr/lib64/R/library/qtl/html/find.markerpos.html
/usr/lib64/R/library/qtl/html/find.pheno.html
/usr/lib64/R/library/qtl/html/find.pseudomarker.html
/usr/lib64/R/library/qtl/html/findDupMarkers.html
/usr/lib64/R/library/qtl/html/find_large_intervals.html
/usr/lib64/R/library/qtl/html/findmarkerindex.html
/usr/lib64/R/library/qtl/html/fitqtl.html
/usr/lib64/R/library/qtl/html/fitstahl.html
/usr/lib64/R/library/qtl/html/flip.order.html
/usr/lib64/R/library/qtl/html/formLinkageGroups.html
/usr/lib64/R/library/qtl/html/formMarkerCovar.html
/usr/lib64/R/library/qtl/html/geno.crosstab.html
/usr/lib64/R/library/qtl/html/geno.image.html
/usr/lib64/R/library/qtl/html/geno.table.html
/usr/lib64/R/library/qtl/html/getid.html
/usr/lib64/R/library/qtl/html/groupclusteredheatmap.html
/usr/lib64/R/library/qtl/html/hyper.html
/usr/lib64/R/library/qtl/html/inferFounderHap.html
/usr/lib64/R/library/qtl/html/inferredpartitions.html
/usr/lib64/R/library/qtl/html/interpPositions.html
/usr/lib64/R/library/qtl/html/jittermap.html
/usr/lib64/R/library/qtl/html/listeria.html
/usr/lib64/R/library/qtl/html/locateXO.html
/usr/lib64/R/library/qtl/html/locations.html
/usr/lib64/R/library/qtl/html/lodint.html
/usr/lib64/R/library/qtl/html/makeqtl.html
/usr/lib64/R/library/qtl/html/map10.html
/usr/lib64/R/library/qtl/html/map2table.html
/usr/lib64/R/library/qtl/html/mapthis.html
/usr/lib64/R/library/qtl/html/markerlrt.html
/usr/lib64/R/library/qtl/html/markernames.html
/usr/lib64/R/library/qtl/html/max.scanPhyloQTL.html
/usr/lib64/R/library/qtl/html/max.scanone.html
/usr/lib64/R/library/qtl/html/max.scantwo.html
/usr/lib64/R/library/qtl/html/movemarker.html
/usr/lib64/R/library/qtl/html/mqmaugment.html
/usr/lib64/R/library/qtl/html/mqmautocofactors.html
/usr/lib64/R/library/qtl/html/mqmextractmarkers.html
/usr/lib64/R/library/qtl/html/mqmfind.marker.html
/usr/lib64/R/library/qtl/html/mqmgetmodel.html
/usr/lib64/R/library/qtl/html/mqmpermutation.html
/usr/lib64/R/library/qtl/html/mqmplotcircle.html
/usr/lib64/R/library/qtl/html/mqmplotcistrans.html
/usr/lib64/R/library/qtl/html/mqmplotclusteredheatmap.html
/usr/lib64/R/library/qtl/html/mqmplotcofactors.html
/usr/lib64/R/library/qtl/html/mqmplotdirectedqtl.html
/usr/lib64/R/library/qtl/html/mqmplotheatmap.html
/usr/lib64/R/library/qtl/html/mqmplotmultitrait.html
/usr/lib64/R/library/qtl/html/mqmplotpermutations.html
/usr/lib64/R/library/qtl/html/mqmplotsingletrait.html
/usr/lib64/R/library/qtl/html/mqmprocesspermutation.html
/usr/lib64/R/library/qtl/html/mqmscan.html
/usr/lib64/R/library/qtl/html/mqmscanall.html
/usr/lib64/R/library/qtl/html/mqmscanfdr.html
/usr/lib64/R/library/qtl/html/mqmsetcofactors.html
/usr/lib64/R/library/qtl/html/mqmtestnormal.html
/usr/lib64/R/library/qtl/html/multitrait.html
/usr/lib64/R/library/qtl/html/nchr.html
/usr/lib64/R/library/qtl/html/nind.html
/usr/lib64/R/library/qtl/html/nmar.html
/usr/lib64/R/library/qtl/html/nmissing.html
/usr/lib64/R/library/qtl/html/nphe.html
/usr/lib64/R/library/qtl/html/nqrank.html
/usr/lib64/R/library/qtl/html/nqtl.html
/usr/lib64/R/library/qtl/html/ntyped.html
/usr/lib64/R/library/qtl/html/nullmarkers.html
/usr/lib64/R/library/qtl/html/orderMarkers.html
/usr/lib64/R/library/qtl/html/phenames.html
/usr/lib64/R/library/qtl/html/pickMarkerSubset.html
/usr/lib64/R/library/qtl/html/plot.comparegeno.html
/usr/lib64/R/library/qtl/html/plot.cross.html
/usr/lib64/R/library/qtl/html/plot.errorlod.html
/usr/lib64/R/library/qtl/html/plot.geno.html
/usr/lib64/R/library/qtl/html/plot.info.html
/usr/lib64/R/library/qtl/html/plot.map.html
/usr/lib64/R/library/qtl/html/plot.missing.html
/usr/lib64/R/library/qtl/html/plot.pheno.html
/usr/lib64/R/library/qtl/html/plot.pxg.html
/usr/lib64/R/library/qtl/html/plot.qtl.html
/usr/lib64/R/library/qtl/html/plot.rf.html
/usr/lib64/R/library/qtl/html/plot.rfmatrix.html
/usr/lib64/R/library/qtl/html/plot.scanPhyloQTL.html
/usr/lib64/R/library/qtl/html/plot.scanone.html
/usr/lib64/R/library/qtl/html/plot.scanoneboot.html
/usr/lib64/R/library/qtl/html/plot.scanoneperm.html
/usr/lib64/R/library/qtl/html/plot.scantwo.html
/usr/lib64/R/library/qtl/html/plot.scantwoperm.html
/usr/lib64/R/library/qtl/html/plotLodProfile.html
/usr/lib64/R/library/qtl/html/plotModel.html
/usr/lib64/R/library/qtl/html/pull.argmaxgeno.html
/usr/lib64/R/library/qtl/html/pull.draws.html
/usr/lib64/R/library/qtl/html/pull.geno.html
/usr/lib64/R/library/qtl/html/pull.genoprob.html
/usr/lib64/R/library/qtl/html/pull.map.html
/usr/lib64/R/library/qtl/html/pull.markers.html
/usr/lib64/R/library/qtl/html/pull.pheno.html
/usr/lib64/R/library/qtl/html/pull.rf.html
/usr/lib64/R/library/qtl/html/qtl-internal.html
/usr/lib64/R/library/qtl/html/qtlversion.html
/usr/lib64/R/library/qtl/html/read.cross.html
/usr/lib64/R/library/qtl/html/readMWril.html
/usr/lib64/R/library/qtl/html/reduce2grid.html
/usr/lib64/R/library/qtl/html/refineqtl.html
/usr/lib64/R/library/qtl/html/reorderqtl.html
/usr/lib64/R/library/qtl/html/replace.map.html
/usr/lib64/R/library/qtl/html/replacemap.scanone.html
/usr/lib64/R/library/qtl/html/replacemap.scantwo.html
/usr/lib64/R/library/qtl/html/replaceqtl.html
/usr/lib64/R/library/qtl/html/rescalemap.html
/usr/lib64/R/library/qtl/html/ripple.html
/usr/lib64/R/library/qtl/html/scanPhyloQTL.html
/usr/lib64/R/library/qtl/html/scanone.html
/usr/lib64/R/library/qtl/html/scanoneboot.html
/usr/lib64/R/library/qtl/html/scanonevar.html
/usr/lib64/R/library/qtl/html/scanonevar.meanperm.html
/usr/lib64/R/library/qtl/html/scanonevar.varperm.html
/usr/lib64/R/library/qtl/html/scanqtl.html
/usr/lib64/R/library/qtl/html/scantwo.html
/usr/lib64/R/library/qtl/html/scantwopermhk.html
/usr/lib64/R/library/qtl/html/shiftmap.html
/usr/lib64/R/library/qtl/html/sim.cross.html
/usr/lib64/R/library/qtl/html/sim.geno.html
/usr/lib64/R/library/qtl/html/sim.map.html
/usr/lib64/R/library/qtl/html/simFounderSnps.html
/usr/lib64/R/library/qtl/html/simPhyloQTL.html
/usr/lib64/R/library/qtl/html/simulateMissingData.html
/usr/lib64/R/library/qtl/html/stepwiseqtl.html
/usr/lib64/R/library/qtl/html/strip.partials.html
/usr/lib64/R/library/qtl/html/subset.cross.html
/usr/lib64/R/library/qtl/html/subset.map.html
/usr/lib64/R/library/qtl/html/subset.scanone.html
/usr/lib64/R/library/qtl/html/subset.scanoneperm.html
/usr/lib64/R/library/qtl/html/subset.scantwo.html
/usr/lib64/R/library/qtl/html/subset.scantwoperm.html
/usr/lib64/R/library/qtl/html/summary.comparegeno.html
/usr/lib64/R/library/qtl/html/summary.cross.html
/usr/lib64/R/library/qtl/html/summary.fitqtl.html
/usr/lib64/R/library/qtl/html/summary.map.html
/usr/lib64/R/library/qtl/html/summary.qtl.html
/usr/lib64/R/library/qtl/html/summary.ripple.html
/usr/lib64/R/library/qtl/html/summary.scanPhyloQTL.html
/usr/lib64/R/library/qtl/html/summary.scanone.html
/usr/lib64/R/library/qtl/html/summary.scanoneboot.html
/usr/lib64/R/library/qtl/html/summary.scanoneperm.html
/usr/lib64/R/library/qtl/html/summary.scantwo.html
/usr/lib64/R/library/qtl/html/summary.scantwo.old.html
/usr/lib64/R/library/qtl/html/summary.scantwoperm.html
/usr/lib64/R/library/qtl/html/switch.order.html
/usr/lib64/R/library/qtl/html/switchAlleles.html
/usr/lib64/R/library/qtl/html/table2map.html
/usr/lib64/R/library/qtl/html/top.errorlod.html
/usr/lib64/R/library/qtl/html/totmar.html
/usr/lib64/R/library/qtl/html/transformPheno.html
/usr/lib64/R/library/qtl/html/tryallpositions.html
/usr/lib64/R/library/qtl/html/typingGap.html
/usr/lib64/R/library/qtl/html/write.cross.html
/usr/lib64/R/library/qtl/html/xaxisloc.scanone.html
/usr/lib64/R/library/qtl/libs
/usr/lib64/R/library/qtl/libs/qtl.so
/usr/lib64/R/library/qtl/sampledata
/usr/lib64/R/library/qtl/sampledata/README.txt
/usr/lib64/R/library/qtl/sampledata/gen.txt
/usr/lib64/R/library/qtl/sampledata/listeria.csv
/usr/lib64/R/library/qtl/sampledata/listeria.qtx
/usr/lib64/R/library/qtl/sampledata/listeria_gen.csv
/usr/lib64/R/library/qtl/sampledata/listeria_gen_rot.csv
/usr/lib64/R/library/qtl/sampledata/listeria_map.txt
/usr/lib64/R/library/qtl/sampledata/listeria_maps.txt
/usr/lib64/R/library/qtl/sampledata/listeria_phe.csv
/usr/lib64/R/library/qtl/sampledata/listeria_phe_rot.csv
/usr/lib64/R/library/qtl/sampledata/listeria_qc_cro.txt
/usr/lib64/R/library/qtl/sampledata/listeria_qc_map.txt
/usr/lib64/R/library/qtl/sampledata/listeria_raw.txt
/usr/lib64/R/library/qtl/sampledata/listeria_rot.csv
/usr/lib64/R/library/qtl/sampledata/map.txt
/usr/lib64/R/library/qtl/sampledata/phe.txt
References
Summary
In this tutorial we learn how to install R-qtl on CentOS 8 using yum and dnf.