How To Install relion on Debian 12
Introduction
In this tutorial we learn how to install relion
on Debian 12.
What is relion
relion is:
RELION (for REgularised LIkelihood OptimisatioN) is a stand-alone computer program for Maximum A Posteriori refinement of (multiple) 3D reconstructions or 2D class averages in cryo-electron microscopy.
RELION provides a GUI, several command-line tools in parallel (MPI) and serial versions, optionally with CUDA/GPU support.
relion provides the serial and parallel (MPI) command-line tools without CUDA/GPU support.
There are three methods to install relion
on Debian 12. We can use apt-get
, apt
and aptitude
. In the following sections we will describe each method. You can choose one of them.
Install relion Using apt-get
Update apt database with apt-get
using the following command.
sudo apt-get update
After updating apt database, We can install relion
using apt-get
by running the following command:
sudo apt-get -y install relion
Install relion Using apt
Update apt database with apt
using the following command.
sudo apt update
After updating apt database, We can install relion
using apt
by running the following command:
sudo apt -y install relion
Install relion Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude
using the following command.
sudo aptitude update
After updating apt database, We can install relion
using aptitude
by running the following command:
sudo aptitude -y install relion
How To Uninstall relion on Debian 12
To uninstall only the relion
package we can use the following command:
sudo apt-get remove relion
Uninstall relion And Its Dependencies
To uninstall relion
and its dependencies that are no longer needed by Debian 12, we can use the command below:
sudo apt-get -y autoremove relion
Remove relion Configurations and Data
To remove relion
configuration and data from Debian 12 we can use the following command:
sudo apt-get -y purge relion
Remove relion configuration, data, and all of its dependencies
We can use the following command to remove relion
configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge relion
Dependencies
relion have the following dependencies:
References
Summary
In this tutorial we learn how to install relion
package on Debian 12 using different package management tools: apt
, apt-get
and aptitude
.