How To Install r-cran-samr on Debian 12
Introduction
In this tutorial we learn how to install r-cran-samr
on Debian 12.
What is r-cran-samr
r-cran-samr is:
This GNU R package provides significance analysis of microarrays. A microarray is a multiplex lab-on-a-chip. It is a 2D array on a solid substrate (usually a glass slide or silicon thin-film cell) that assays large amounts of biological material using high-throughput screening miniaturized, multiplexed and parallel processing and detection methods.
This package helps analysing this kind of microarrays.
There are three methods to install r-cran-samr
on Debian 12. We can use apt-get
, apt
and aptitude
. In the following sections we will describe each method. You can choose one of them.
Install r-cran-samr Using apt-get
Update apt database with apt-get
using the following command.
sudo apt-get update
After updating apt database, We can install r-cran-samr
using apt-get
by running the following command:
sudo apt-get -y install r-cran-samr
Install r-cran-samr Using apt
Update apt database with apt
using the following command.
sudo apt update
After updating apt database, We can install r-cran-samr
using apt
by running the following command:
sudo apt -y install r-cran-samr
Install r-cran-samr Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude
using the following command.
sudo aptitude update
After updating apt database, We can install r-cran-samr
using aptitude
by running the following command:
sudo aptitude -y install r-cran-samr
How To Uninstall r-cran-samr on Debian 12
To uninstall only the r-cran-samr
package we can use the following command:
sudo apt-get remove r-cran-samr
Uninstall r-cran-samr And Its Dependencies
To uninstall r-cran-samr
and its dependencies that are no longer needed by Debian 12, we can use the command below:
sudo apt-get -y autoremove r-cran-samr
Remove r-cran-samr Configurations and Data
To remove r-cran-samr
configuration and data from Debian 12 we can use the following command:
sudo apt-get -y purge r-cran-samr
Remove r-cran-samr configuration, data, and all of its dependencies
We can use the following command to remove r-cran-samr
configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge r-cran-samr
Dependencies
r-cran-samr have the following dependencies:
- r-base-core
- r-api-4.0
- r-bioc-impute
- r-cran-matrixstats
- r-cran-shiny
- r-cran-shinyfiles
- r-cran-openxlsx
- r-cran-gsa
- libc6
References
Summary
In this tutorial we learn how to install r-cran-samr
package on Debian 12 using different package management tools: apt
, apt-get
and aptitude
.