How To Install r-cran-gprofiler on Ubuntu 20.04
Introduction
In this tutorial we learn how to install r-cran-gprofiler
on Ubuntu 20.04.
What is r-cran-gprofiler
r-cran-gprofiler is:
Functional enrichment analysis, gene identifier conversion and mapping homologous genes across related organisms via the ‘g:Profiler’ toolkit (https://biit.cs.ut.ee/gprofiler/).
There are three methods to install r-cran-gprofiler
on Ubuntu 20.04. We can use apt-get
, apt
and aptitude
. In the following sections we will describe each method. You can choose one of them.
Install r-cran-gprofiler Using apt-get
Update apt database with apt-get
using the following command.
sudo apt-get update
After updating apt database, We can install r-cran-gprofiler
using apt-get
by running the following command:
sudo apt-get -y install r-cran-gprofiler
Install r-cran-gprofiler Using apt
Update apt database with apt
using the following command.
sudo apt update
After updating apt database, We can install r-cran-gprofiler
using apt
by running the following command:
sudo apt -y install r-cran-gprofiler
Install r-cran-gprofiler Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Ubuntu. Update apt database with aptitude
using the following command.
sudo aptitude update
After updating apt database, We can install r-cran-gprofiler
using aptitude
by running the following command:
sudo aptitude -y install r-cran-gprofiler
How To Uninstall r-cran-gprofiler on Ubuntu 20.04
To uninstall only the r-cran-gprofiler
package we can use the following command:
sudo apt-get remove r-cran-gprofiler
Uninstall r-cran-gprofiler And Its Dependencies
To uninstall r-cran-gprofiler
and its dependencies that are no longer needed by Ubuntu 20.04, we can use the command below:
sudo apt-get -y autoremove r-cran-gprofiler
Remove r-cran-gprofiler Configurations and Data
To remove r-cran-gprofiler
configuration and data from Ubuntu 20.04 we can use the following command:
sudo apt-get -y purge r-cran-gprofiler
Remove r-cran-gprofiler configuration, data, and all of its dependencies
We can use the following command to remove r-cran-gprofiler
configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge r-cran-gprofiler
References
Summary
In this tutorial we learn how to install r-cran-gprofiler
package on Ubuntu 20.04 using different package management tools: apt
, apt-get
and aptitude
.