How To Install r-bioc-wrench on Kali Linux

In this tutorial we learn how to install r-bioc-wrench on Kali Linux. r-bioc-wrench is GNU R wrench normalization for sparse count data

Introduction

In this tutorial we learn how to install r-bioc-wrench on Kali Linux.

What is r-bioc-wrench

r-bioc-wrench is:

Wrench is a package for normalization sparse genomic count data, like that arising from 16s metagenomic surveys.

There are three methods to install r-bioc-wrench on Kali Linux. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.

Install r-bioc-wrench Using apt-get

Update apt database with apt-get using the following command.

sudo apt-get update

After updating apt database, We can install r-bioc-wrench using apt-get by running the following command:

sudo apt-get -y install r-bioc-wrench

Install r-bioc-wrench Using apt

Update apt database with apt using the following command.

sudo apt update

After updating apt database, We can install r-bioc-wrench using apt by running the following command:

sudo apt -y install r-bioc-wrench

Install r-bioc-wrench Using aptitude

If you want to follow this method, you might need to install aptitude on Kali Linux first since aptitude is usually not installed by default on Kali Linux. Update apt database with aptitude using the following command.

sudo aptitude update

After updating apt database, We can install r-bioc-wrench using aptitude by running the following command:

sudo aptitude -y install r-bioc-wrench

How To Uninstall r-bioc-wrench on Kali Linux

To uninstall only the r-bioc-wrench package we can use the following command:

sudo apt-get remove r-bioc-wrench

Uninstall r-bioc-wrench And Its Dependencies

To uninstall r-bioc-wrench and its dependencies that are no longer needed by Kali Linux, we can use the command below:

sudo apt-get -y autoremove r-bioc-wrench

Remove r-bioc-wrench Configurations and Data

To remove r-bioc-wrench configuration and data from Kali Linux we can use the following command:

sudo apt-get -y purge r-bioc-wrench

Remove r-bioc-wrench configuration, data, and all of its dependencies

We can use the following command to remove r-bioc-wrench configurations, data and all of its dependencies, we can use the following command:

sudo apt-get -y autoremove --purge r-bioc-wrench

Dependencies

r-bioc-wrench have the following dependencies:

References

Summary

In this tutorial we learn how to install r-bioc-wrench package on Kali Linux using different package management tools: apt, apt-get and aptitude.