How To Install r-bioc-aroma.light on Debian 9

In this tutorial we learn how to install r-bioc-aroma.light on Debian 9. r-bioc-aroma.light is BioConductor methods normalization and visualization of microarray data

Introduction

In this tutorial we learn how to install r-bioc-aroma.light on Debian 9.

What is r-bioc-aroma.light

r-bioc-aroma.light is:

This BioConductor module provides light-weight methods for normalization and visualization of microarray data using only basic R data types.

Methods for microarray analysis that take basic data types such as matrices and lists of vectors. These methods can be used standalone, be utilized in other packages, or be wrapped up in higher-level classes.

There are three methods to install r-bioc-aroma.light on Debian 9. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.

Install r-bioc-aroma.light Using apt-get

Update apt database with apt-get using the following command.

sudo apt-get update

After updating apt database, We can install r-bioc-aroma.light using apt-get by running the following command:

sudo apt-get -y install r-bioc-aroma.light

Install r-bioc-aroma.light Using apt

Update apt database with apt using the following command.

sudo apt update

After updating apt database, We can install r-bioc-aroma.light using apt by running the following command:

sudo apt -y install r-bioc-aroma.light

Install r-bioc-aroma.light Using aptitude

If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude using the following command.

sudo aptitude update

After updating apt database, We can install r-bioc-aroma.light using aptitude by running the following command:

sudo aptitude -y install r-bioc-aroma.light

How To Uninstall r-bioc-aroma.light on Debian 9

To uninstall only the r-bioc-aroma.light package we can use the following command:

sudo apt-get remove r-bioc-aroma.light

Uninstall r-bioc-aroma.light And Its Dependencies

To uninstall r-bioc-aroma.light and its dependencies that are no longer needed by Debian 9, we can use the command below:

sudo apt-get -y autoremove r-bioc-aroma.light

Remove r-bioc-aroma.light Configurations and Data

To remove r-bioc-aroma.light configuration and data from Debian 9 we can use the following command:

sudo apt-get -y purge r-bioc-aroma.light

Remove r-bioc-aroma.light configuration, data, and all of its dependencies

We can use the following command to remove r-bioc-aroma.light configurations, data and all of its dependencies, we can use the following command:

sudo apt-get -y autoremove --purge r-bioc-aroma.light

Dependencies

r-bioc-aroma.light have the following dependencies:

References

Summary

In this tutorial we learn how to install r-bioc-aroma.light package on Debian 9 using different package management tools: apt, apt-get and aptitude.