How To Install python3-peptidebuilder on Kali Linux

In this tutorial we learn how to install python3-peptidebuilder on Kali Linux. python3-peptidebuilder is generate atomic oligopeptide 3D structure from sequence

Introduction

In this tutorial we learn how to install python3-peptidebuilder on Kali Linux.

What is python3-peptidebuilder

python3-peptidebuilder is:

PeptideBuilder is a simple Python library to generate model peptides. Typically on daisychains a few residues in e.g. biopython, and so does PeptideBuilder, but it does it right.

Parameters like the backbone formation can be specified ab initio, rotamers/energy minimisation is left to respective specialist tools.

There are three methods to install python3-peptidebuilder on Kali Linux. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.

Install python3-peptidebuilder Using apt-get

Update apt database with apt-get using the following command.

sudo apt-get update

After updating apt database, We can install python3-peptidebuilder using apt-get by running the following command:

sudo apt-get -y install python3-peptidebuilder

Install python3-peptidebuilder Using apt

Update apt database with apt using the following command.

sudo apt update

After updating apt database, We can install python3-peptidebuilder using apt by running the following command:

sudo apt -y install python3-peptidebuilder

Install python3-peptidebuilder Using aptitude

If you want to follow this method, you might need to install aptitude on Kali Linux first since aptitude is usually not installed by default on Kali Linux. Update apt database with aptitude using the following command.

sudo aptitude update

After updating apt database, We can install python3-peptidebuilder using aptitude by running the following command:

sudo aptitude -y install python3-peptidebuilder

How To Uninstall python3-peptidebuilder on Kali Linux

To uninstall only the python3-peptidebuilder package we can use the following command:

sudo apt-get remove python3-peptidebuilder

Uninstall python3-peptidebuilder And Its Dependencies

To uninstall python3-peptidebuilder and its dependencies that are no longer needed by Kali Linux, we can use the command below:

sudo apt-get -y autoremove python3-peptidebuilder

Remove python3-peptidebuilder Configurations and Data

To remove python3-peptidebuilder configuration and data from Kali Linux we can use the following command:

sudo apt-get -y purge python3-peptidebuilder

Remove python3-peptidebuilder configuration, data, and all of its dependencies

We can use the following command to remove python3-peptidebuilder configurations, data and all of its dependencies, we can use the following command:

sudo apt-get -y autoremove --purge python3-peptidebuilder

Dependencies

python3-peptidebuilder have the following dependencies:

References

Summary

In this tutorial we learn how to install python3-peptidebuilder package on Kali Linux using different package management tools: apt, apt-get and aptitude.