How To Install python-pbsuite-utils on Debian 10
Introduction
In this tutorial we learn how to install python-pbsuite-utils on Debian 10.
What is python-pbsuite-utils
python-pbsuite-utils is:
The PBSuite currently contains two projects created and maintained by Adam English for analysis of Pacific Biosciences long-read sequencing data.
- PBJelly - genome upgrading tool
- PBHoney - structural variation discovery
This package contains Python 2 utilities for the suite.
There are three methods to install python-pbsuite-utils on Debian 10. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install python-pbsuite-utils Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get update
After updating apt database, We can install python-pbsuite-utils using apt-get by running the following command:
sudo apt-get -y install python-pbsuite-utils
Install python-pbsuite-utils Using apt
Update apt database with apt using the following command.
sudo apt update
After updating apt database, We can install python-pbsuite-utils using apt by running the following command:
sudo apt -y install python-pbsuite-utils
Install python-pbsuite-utils Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude using the following command.
sudo aptitude update
After updating apt database, We can install python-pbsuite-utils using aptitude by running the following command:
sudo aptitude -y install python-pbsuite-utils
How To Uninstall python-pbsuite-utils on Debian 10
To uninstall only the python-pbsuite-utils package we can use the following command:
sudo apt-get remove python-pbsuite-utils
Uninstall python-pbsuite-utils And Its Dependencies
To uninstall python-pbsuite-utils and its dependencies that are no longer needed by Debian 10, we can use the command below:
sudo apt-get -y autoremove python-pbsuite-utils
Remove python-pbsuite-utils Configurations and Data
To remove python-pbsuite-utils configuration and data from Debian 10 we can use the following command:
sudo apt-get -y purge python-pbsuite-utils
Remove python-pbsuite-utils configuration, data, and all of its dependencies
We can use the following command to remove python-pbsuite-utils configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge python-pbsuite-utils
Dependencies
python-pbsuite-utils have the following dependencies:
References
Summary
In this tutorial we learn how to install python-pbsuite-utils package on Debian 10 using different package management tools: apt, apt-get and aptitude.
