How To Install mira-rfam-12s-rrna on Ubuntu 18.04
Introduction
In this tutorial we learn how to install mira-rfam-12s-rrna
on Ubuntu 18.04.
What is mira-rfam-12s-rrna
mira-rfam-12s-rrna is:
The mira genome fragment assembler is a specialised assembler for sequencing projects classified as ‘hard’ due to high number of similar repeats.
This package contains data to enable MIRA and MIRABAIT to search for rRNA and rDNA. This data set contains an excerpt of the RFAM database.
There are three methods to install mira-rfam-12s-rrna
on Ubuntu 18.04. We can use apt-get
, apt
and aptitude
. In the following sections we will describe each method. You can choose one of them.
Install mira-rfam-12s-rrna Using apt-get
Update apt database with apt-get
using the following command.
sudo apt-get update
After updating apt database, We can install mira-rfam-12s-rrna
using apt-get
by running the following command:
sudo apt-get -y install mira-rfam-12s-rrna
Install mira-rfam-12s-rrna Using apt
Update apt database with apt
using the following command.
sudo apt update
After updating apt database, We can install mira-rfam-12s-rrna
using apt
by running the following command:
sudo apt -y install mira-rfam-12s-rrna
Install mira-rfam-12s-rrna Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Ubuntu. Update apt database with aptitude
using the following command.
sudo aptitude update
After updating apt database, We can install mira-rfam-12s-rrna
using aptitude
by running the following command:
sudo aptitude -y install mira-rfam-12s-rrna
How To Uninstall mira-rfam-12s-rrna on Ubuntu 18.04
To uninstall only the mira-rfam-12s-rrna
package we can use the following command:
sudo apt-get remove mira-rfam-12s-rrna
Uninstall mira-rfam-12s-rrna And Its Dependencies
To uninstall mira-rfam-12s-rrna
and its dependencies that are no longer needed by Ubuntu 18.04, we can use the command below:
sudo apt-get -y autoremove mira-rfam-12s-rrna
Remove mira-rfam-12s-rrna Configurations and Data
To remove mira-rfam-12s-rrna
configuration and data from Ubuntu 18.04 we can use the following command:
sudo apt-get -y purge mira-rfam-12s-rrna
Remove mira-rfam-12s-rrna configuration, data, and all of its dependencies
We can use the following command to remove mira-rfam-12s-rrna
configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge mira-rfam-12s-rrna
References
Summary
In this tutorial we learn how to install mira-rfam-12s-rrna
package on Ubuntu 18.04 using different package management tools: apt
, apt-get
and aptitude
.