How To Install libpbihdf on Debian 10

Learn how to install libpbihdf on Debian 10 with this tutorial. libpbihdf is tools for handling PacBio hdf5 files

Introduction

In this tutorial we learn how to install libpbihdf on Debian 10.

What is libpbihdf

libpbihdf is:

Blasr_libcpp is a library used by blasr and other executables such as samtoh5, loadPulses for analyzing PacBio sequences. This library contains three sub-libraries, including pbdata, hdf and alignment.

This package contains the hdf sublibrary.

There are three methods to install libpbihdf on Debian 10. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.

Install libpbihdf Using apt-get

Update apt database with apt-get using the following command.

sudo apt-get update

After updating apt database, We can install libpbihdf using apt-get by running the following command:

sudo apt-get -y install libpbihdf

Install libpbihdf Using apt

Update apt database with apt using the following command.

sudo apt update

After updating apt database, We can install libpbihdf using apt by running the following command:

sudo apt -y install libpbihdf

Install libpbihdf Using aptitude

If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude using the following command.

sudo aptitude update

After updating apt database, We can install libpbihdf using aptitude by running the following command:

sudo aptitude -y install libpbihdf

How To Uninstall libpbihdf on Debian 10

To uninstall only the libpbihdf package we can use the following command:

sudo apt-get remove libpbihdf

Uninstall libpbihdf And Its Dependencies

To uninstall libpbihdf and its dependencies that are no longer needed by Debian 10, we can use the command below:

sudo apt-get -y autoremove libpbihdf

Remove libpbihdf Configurations and Data

To remove libpbihdf configuration and data from Debian 10 we can use the following command:

sudo apt-get -y purge libpbihdf

Remove libpbihdf configuration, data, and all of its dependencies

We can use the following command to remove libpbihdf configurations, data and all of its dependencies, we can use the following command:

sudo apt-get -y autoremove --purge libpbihdf

Dependencies

libpbihdf have the following dependencies:

References

Summary

In this tutorial we learn how to install libpbihdf package on Debian 10 using different package management tools: apt, apt-get and aptitude.